RNA–Protein interactions for RNA: ENST00000552999.1

AC093012.1-201, humanhuman

TSL 3 BASIC

Gene AC093012.1, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC093012.1-201ENST00000552999 AEBP2Q6ZN18 517 aaPredicted RBP28.12■■■□□ 2.09
AC093012.1-201ENST00000552999 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
AC093012.1-201ENST00000552999 SENP3Q9H4L4 574 aaPredicted RBP23.96■■□□□ 1.43
AC093012.1-201ENST00000552999 PHF23Q9BUL5 403 aaPredicted RBP23.64■■□□□ 1.37
AC093012.1-201ENST00000552999 FOXD1Q16676 465 aa22.3■■□□□ 1.16
AC093012.1-201ENST00000552999 PLPPR3Q6T4P5 718 aa21.53■■□□□ 1.04
AC093012.1-201ENST00000552999 POTEDQ86YR6 584 aa21.49■■□□□ 1.03
AC093012.1-201ENST00000552999 PPP6R1Q9UPN7 881 aa20.96■□□□□ 0.95
AC093012.1-201ENST00000552999 ADRA2BP18089 450 aa20.87■□□□□ 0.93
AC093012.1-201ENST00000552999 PIAS4Q8N2W9 510 aaPredicted RBP20.84■□□□□ 0.93
AC093012.1-201ENST00000552999 MSH5O43196 834 aa20.82■□□□□ 0.92
AC093012.1-201ENST00000552999 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
AC093012.1-201ENST00000552999 MAPK8IP2Q13387 824 aaPredicted RBP19.12■□□□□ 0.65
AC093012.1-201ENST00000552999 DMRT2Q9Y5R5 561 aa19.04■□□□□ 0.64
AC093012.1-201ENST00000552999 PPP4R3CPQ6ZMV5 832 aa18.87■□□□□ 0.61
AC093012.1-201ENST00000552999 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
AC093012.1-201ENST00000552999 HOXD11P31277 338 aaPredicted RBP18.43■□□□□ 0.54
AC093012.1-201ENST00000552999 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
AC093012.1-201ENST00000552999 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
AC093012.1-201ENST00000552999 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
AC093012.1-201ENST00000552999 NPM3O75607 178 aaKnown RBP17.94■□□□□ 0.46
AC093012.1-201ENST00000552999 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
AC093012.1-201ENST00000552999 RNF39Q9H2S5 420 aa17.8■□□□□ 0.44
AC093012.1-201ENST00000552999 KCNA4P22459 653 aa17.71■□□□□ 0.43
AC093012.1-201ENST00000552999 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
AC093012.1-201ENST00000552999 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
AC093012.1-201ENST00000552999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.38
AC093012.1-201ENST00000552999 U3KPZ7 1027 aaPredicted RBP17.16■□□□□ 0.34
AC093012.1-201ENST00000552999 SLC4A2P04920 1241 aa17.11■□□□□ 0.33
AC093012.1-201ENST00000552999 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
AC093012.1-201ENST00000552999 CAPN15O75808 1086 aa16.76■□□□□ 0.27
AC093012.1-201ENST00000552999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
AC093012.1-201ENST00000552999 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
AC093012.1-201ENST00000552999 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
AC093012.1-201ENST00000552999 DSG3P32926 999 aa16.7■□□□□ 0.26
AC093012.1-201ENST00000552999 APLP2Q06481 763 aa16.69■□□□□ 0.26
AC093012.1-201ENST00000552999 SAMD1Q6SPF0 538 aaPredicted RBP16.65■□□□□ 0.26
AC093012.1-201ENST00000552999 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
AC093012.1-201ENST00000552999 POTEHQ6S545 545 aa16.57■□□□□ 0.24
AC093012.1-201ENST00000552999 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
AC093012.1-201ENST00000552999 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
AC093012.1-201ENST00000552999 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
AC093012.1-201ENST00000552999 ABCB7O75027 752 aa16.38■□□□□ 0.21
AC093012.1-201ENST00000552999 ZBTB22O15209 634 aa16.33■□□□□ 0.2
AC093012.1-201ENST00000552999 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
AC093012.1-201ENST00000552999 POLA2Q14181 598 aa16.14■□□□□ 0.17
AC093012.1-201ENST00000552999 ATXN8OSP0DMR3 200 aa16.03■□□□□ 0.16
AC093012.1-201ENST00000552999 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
AC093012.1-201ENST00000552999 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
AC093012.1-201ENST00000552999 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
AC093012.1-201ENST00000552999 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
AC093012.1-201ENST00000552999 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
AC093012.1-201ENST00000552999 FBLN2P98095 1184 aa15.52■□□□□ 0.08
AC093012.1-201ENST00000552999 CHRDL2Q6WN34 429 aa15.5■□□□□ 0.07
AC093012.1-201ENST00000552999 EHMT2Q96KQ7 1210 aa15.49■□□□□ 0.07
AC093012.1-201ENST00000552999 MKRN4PQ13434 485 aaPredicted RBP15.47■□□□□ 0.07
AC093012.1-201ENST00000552999 REM2Q8IYK8 340 aaPredicted RBP15.43■□□□□ 0.06
AC093012.1-201ENST00000552999 SPDYE2BA6NHP3 402 aa15.41■□□□□ 0.06
AC093012.1-201ENST00000552999 SPDYE6P0CI01 402 aa15.41■□□□□ 0.06
AC093012.1-201ENST00000552999 SPDYE2Q495Y8 402 aa15.41■□□□□ 0.06
AC093012.1-201ENST00000552999 PITPNM1O00562 1244 aa15.27■□□□□ 0.04
AC093012.1-201ENST00000552999 SSUH2Q9Y2M2 353 aa15.25■□□□□ 0.03
AC093012.1-201ENST00000552999 ZNF692Q9BU19 519 aaPredicted RBP15.19■□□□□ 0.02
AC093012.1-201ENST00000552999 PIP4P2Q8N4L2 257 aa15.16■□□□□ 0.02
AC093012.1-201ENST00000552999 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
AC093012.1-201ENST00000552999 SPDYE1Q8NFV5 336 aaPredicted RBP15.08■□□□□ 0
AC093012.1-201ENST00000552999 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
AC093012.1-201ENST00000552999 CLEC11AQ9Y240 323 aa14.96□□□□□ -0.01
AC093012.1-201ENST00000552999 PRKAR2AP13861 404 aaKnown RBP14.85□□□□□ -0.03
AC093012.1-201ENST00000552999 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
AC093012.1-201ENST00000552999 HAX1O00165 279 aa14.79□□□□□ -0.04
AC093012.1-201ENST00000552999 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
AC093012.1-201ENST00000552999 PRR29P0C7W0 189 aa14.78□□□□□ -0.04
AC093012.1-201ENST00000552999 CHADLQ6NUI6 762 aa14.69□□□□□ -0.06
AC093012.1-201ENST00000552999 EVX2Q03828 476 aa14.66□□□□□ -0.06
AC093012.1-201ENST00000552999 C19orf67A6NJJ6 358 aa14.64□□□□□ -0.07
AC093012.1-201ENST00000552999 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
AC093012.1-201ENST00000552999 PROM2Q8N271 834 aa14.57□□□□□ -0.08
AC093012.1-201ENST00000552999 FARP1Q9Y4F1 1045 aaPredicted RBP14.54□□□□□ -0.08
AC093012.1-201ENST00000552999 CREBZFQ9NS37 354 aa14.5□□□□□ -0.09
AC093012.1-201ENST00000552999 CD44P16070 742 aaKnown RBP14.39□□□□□ -0.11
AC093012.1-201ENST00000552999 GABBR2O75899 941 aa14.35□□□□□ -0.11
AC093012.1-201ENST00000552999 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
AC093012.1-201ENST00000552999 PLSCR2Q9NRY7 297 aa14.28□□□□□ -0.12
AC093012.1-201ENST00000552999 CLCN6P51797 869 aa14.26□□□□□ -0.13
AC093012.1-201ENST00000552999 ZNF579Q8NAF0 562 aaKnown RBP14.23□□□□□ -0.13
AC093012.1-201ENST00000552999 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
AC093012.1-201ENST00000552999 ZRANB1Q9UGI0 708 aa14.19□□□□□ -0.14
AC093012.1-201ENST00000552999 FKBP8Q14318 412 aa14.18□□□□□ -0.14
AC093012.1-201ENST00000552999 PAK3O75914 559 aaPredicted RBP14.11□□□□□ -0.15
AC093012.1-201ENST00000552999 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
AC093012.1-201ENST00000552999 MIER1Q8N108 512 aa14.04□□□□□ -0.16
AC093012.1-201ENST00000552999 PLEKHG5O94827 1062 aa14.02□□□□□ -0.17
AC093012.1-201ENST00000552999 PHF12Q96QT6 1004 aa14.02□□□□□ -0.17
AC093012.1-201ENST00000552999 GALR2O43603 387 aaPredicted RBP14□□□□□ -0.17
AC093012.1-201ENST00000552999 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
AC093012.1-201ENST00000552999 DCBLD2Q96PD2 775 aa13.95□□□□□ -0.18
AC093012.1-201ENST00000552999 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
AC093012.1-201ENST00000552999 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
AC093012.1-201ENST00000552999 LHX8Q68G74 356 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms