Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 HSPA8P13-201ENST00000523715 472 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC131935.1-201ENST00000524621 333 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 ELOCP31-201ENST00000540463 467 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 AL512360.1-201ENST00000555346 234 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC090415.1-201ENST00000581877 847 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 IGLJCOR18-201ENST00000584002 424 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 AL109918.3-201ENST00000603072 338 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 SUMO2P14-201ENST00000604488 293 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC048344.3-201ENST00000605512 251 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC019257.2-201ENST00000605539 497 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC243756.2-201ENST00000618406 463 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC006504.8-201ENST00000621046 635 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 SP140-201ENST00000343805 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 LCA5-203ENST00000467898 2894 ntTSL 5 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC007614.2-201ENST00000569877 1851 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 GSTA12P-201ENST00000402398 508 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 AL589994.1-201ENST00000404962 340 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC098592.2-201ENST00000413158 265 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 MTATP6P29-201ENST00000415057 132 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 OR2L6P-201ENST00000416377 940 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 OR1AA1P-201ENST00000419597 916 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC008155.1-201ENST00000421078 329 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 CDC42P6-201ENST00000421246 576 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 RPS25P9-201ENST00000435591 252 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AL591379.2-201ENST00000450223 397 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 Z82190.1-201ENST00000454534 490 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 RN7SL267P-201ENST00000485107 261 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC106822.1-201ENST00000502647 526 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 KRT18P54-201ENST00000513396 748 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 RNU6-277P-201ENST00000516272 106 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 FOLH1B-202ENST00000529567 2145 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AL669831.4-202ENST00000590817 238 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AL365434.2-201ENST00000607979 234 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC024560.3-201ENST00000608482 349 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AC092652.3-201ENST00000473426 1517 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 CCR3-201ENST00000357422 2000 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
LRCH3Q96II8 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 AL591543.1-202ENST00000642095 4149 ntBASIC8.73□□□□□ -1.01
LRCH3Q96II8 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
LRCH3Q96II8 UGT2B26P-201ENST00000508672 1613 ntBASIC8.72□□□□□ -1.01
LRCH3Q96II8 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 PLEK-201ENST00000234313 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
LRCH3Q96II8 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LRCH3Q96II8 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms