Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 SAMMSON-209ENST00000641222 1100 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AC092447.7-201ENST00000422212 1621 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 HSPA8P11-201ENST00000508840 1898 ntBASIC9.04□□□□□ -0.96
RC3H1Q5TC82 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
RC3H1Q5TC82 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 OR52K3P-202ENST00000641797 1729 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 PAH-201ENST00000307000 2466 ntTSL 5 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 RNU6-692P-201ENST00000384496 107 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 Y_RNA.560-201ENST00000384689 102 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 MT-TH-201ENST00000387441 69 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 AC019178.1-201ENST00000392337 440 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 AL031577.2-201ENST00000404133 280 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 IGKV1OR2-3-201ENST00000411475 288 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 RPL34P19-201ENST00000415903 342 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 OR6K4P-201ENST00000423179 955 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 RNF19BPX-201ENST00000426224 625 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 AC018804.1-201ENST00000430381 618 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 KCTD9P1-201ENST00000430462 1167 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 RPS26P4-201ENST00000431743 355 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 EEF1E1P1-201ENST00000446998 430 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 AC008280.2-201ENST00000455473 307 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 CTSLP6-201ENST00000458273 1002 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 BNIP3P41-201ENST00000503774 571 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 RNA5SP318-201ENST00000516352 92 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 RNU6-405P-201ENST00000516637 110 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 AC135983.3-201ENST00000528049 1226 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 MT1CP-201ENST00000567054 174 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 MTND1P15-201ENST00000579262 949 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 IGKV1OR2-9-201ENST00000603957 287 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 IGKV1OR2-11-201ENST00000604120 287 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 RACK1-235ENST00000626067 564 ntTSL 2 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 CASC19-274ENST00000642018 970 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC9.03□□□□□ -0.96
RC3H1Q5TC82 OR7E25P-202ENST00000641088 5937 ntBASIC9.03□□□□□ -0.96
RC3H1Q5TC82 HSPD1P4-201ENST00000547203 1702 ntBASIC9.02□□□□□ -0.96
RC3H1Q5TC82 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
RC3H1Q5TC82 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
RC3H1Q5TC82 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
RC3H1Q5TC82 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.96
RC3H1Q5TC82 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
RC3H1Q5TC82 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 LRRC37A17P-201ENST00000570311 4693 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 EXOC7P1-201ENST00000509881 2059 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 MTHFD2P5-201ENST00000320415 844 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 RNA5SP308-201ENST00000362532 115 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 RNU6-1055P-201ENST00000391085 107 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 AC007899.1-201ENST00000412776 775 ntBASIC9.02□□□□□ -0.97
RC3H1Q5TC82 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC9.02□□□□□ -0.97
RC3H1Q5TC82 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms