Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTCH1Q13635 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PTCH1Q13635 FO393409.1-201ENST00000399325 1372 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 AC011369.2-201ENST00000624423 1567 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTCH1Q13635 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTCH1Q13635 PTCD2P2-201ENST00000415579 1095 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC8.28□□□□□ -1.08
PTCH1Q13635 AL390119.1-201ENST00000440329 312 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 AC005532.2-201ENST00000467154 373 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 RN7SL583P-201ENST00000475692 287 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC8.28□□□□□ -1.08
PTCH1Q13635 RNA5SP92-201ENST00000516437 110 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.28□□□□□ -1.08
PTCH1Q13635 KCTD9P4-201ENST00000526766 1166 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC8.28□□□□□ -1.08
PTCH1Q13635 ASB8-215ENST00000540782 659 ntTSL 3 BASIC8.28□□□□□ -1.08
PTCH1Q13635 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC8.28□□□□□ -1.08
PTCH1Q13635 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC8.28□□□□□ -1.08
PTCH1Q13635 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
PTCH1Q13635 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.28□□□□□ -1.08
PTCH1Q13635 Mico1.1-201ENST00000611698 204 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.28□□□□□ -1.08
PTCH1Q13635 OR11H2-202ENST00000641517 1085 ntBASIC8.28□□□□□ -1.08
PTCH1Q13635 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PTCH1Q13635 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTCH1Q13635 AL355377.1-201ENST00000621125 1653 ntBASIC8.27□□□□□ -1.08
PTCH1Q13635 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
PTCH1Q13635 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC8.27□□□□□ -1.08
PTCH1Q13635 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC8.27□□□□□ -1.08
PTCH1Q13635 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
PTCH1Q13635 AL049634.1-201ENST00000453770 1720 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC8.27□□□□□ -1.09
PTCH1Q13635 AC005618.1-201ENST00000606901 3148 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PTCH1Q13635 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
PTCH1Q13635 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
PTCH1Q13635 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
PTCH1Q13635 AC016583.1-201ENST00000624221 2431 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 MRRFP1-201ENST00000435941 1675 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.27□□□□□ -1.09
PTCH1Q13635 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.27□□□□□ -1.09
PTCH1Q13635 FABP7P2-201ENST00000429946 379 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC8.27□□□□□ -1.09
PTCH1Q13635 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PTCH1Q13635 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC8.27□□□□□ -1.09
PTCH1Q13635 AC108161.1-201ENST00000461060 402 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 RPL35AP19-201ENST00000469425 329 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 RN7SL547P-201ENST00000490793 290 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC8.27□□□□□ -1.09
PTCH1Q13635 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.27□□□□□ -1.09
PTCH1Q13635 AL049872.1-201ENST00000556323 322 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC8.27□□□□□ -1.09
PTCH1Q13635 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.27□□□□□ -1.09
PTCH1Q13635 METTL15-211ENST00000634762 718 ntTSL 5 BASIC8.27□□□□□ -1.09
PTCH1Q13635 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
PTCH1Q13635 AC123769.2-201ENST00000624332 5984 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 AC096921.2-201ENST00000561507 1916 ntBASIC8.27□□□□□ -1.09
PTCH1Q13635 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
PTCH1Q13635 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PTCH1Q13635 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.26□□□□□ -1.09
PTCH1Q13635 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.26□□□□□ -1.09
PTCH1Q13635 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.26□□□□□ -1.09
PTCH1Q13635 YES1P1-201ENST00000418510 1628 ntBASIC8.26□□□□□ -1.09
PTCH1Q13635 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PTCH1Q13635 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
PTCH1Q13635 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
PTCH1Q13635 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
PTCH1Q13635 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
PTCH1Q13635 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.26□□□□□ -1.09
PTCH1Q13635 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.26□□□□□ -1.09
PTCH1Q13635 RNA5SP333-201ENST00000363466 118 ntBASIC8.26□□□□□ -1.09
PTCH1Q13635 RNA5SP334-201ENST00000364825 118 ntBASIC8.26□□□□□ -1.09
PTCH1Q13635 RPL37P18-201ENST00000411602 243 ntBASIC8.26□□□□□ -1.09
PTCH1Q13635 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC8.26□□□□□ -1.09
PTCH1Q13635 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.26□□□□□ -1.09
PTCH1Q13635 HMGB3P24-201ENST00000433260 622 ntBASIC8.26□□□□□ -1.09
PTCH1Q13635 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC8.26□□□□□ -1.09
PTCH1Q13635 SDC4P-201ENST00000453285 601 ntBASIC8.26□□□□□ -1.09
PTCH1Q13635 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC8.26□□□□□ -1.09
PTCH1Q13635 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC8.26□□□□□ -1.09
PTCH1Q13635 HAUS8P1-201ENST00000549005 542 ntBASIC8.26□□□□□ -1.09
PTCH1Q13635 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC8.26□□□□□ -1.09
PTCH1Q13635 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC8.26□□□□□ -1.09
PTCH1Q13635 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.26□□□□□ -1.09
PTCH1Q13635 AC008115.4-201ENST00000619780 775 ntBASIC8.26□□□□□ -1.09
PTCH1Q13635 CASC19-264ENST00000641912 1184 ntBASIC8.26□□□□□ -1.09
PTCH1Q13635 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
PTCH1Q13635 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PTCH1Q13635 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PTCH1Q13635 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
PTCH1Q13635 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.26□□□□□ -1.09
PTCH1Q13635 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.26□□□□□ -1.09
PTCH1Q13635 AL157831.2-201ENST00000564681 3095 ntBASIC8.25□□□□□ -1.09
PTCH1Q13635 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC8.25□□□□□ -1.09
PTCH1Q13635 AL391261.1-201ENST00000555712 1479 ntBASIC8.25□□□□□ -1.09
PTCH1Q13635 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
PTCH1Q13635 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
PTCH1Q13635 TNPO1P2-201ENST00000426249 2665 ntBASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms