Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 HLA-DPA3-207ENST00000454398 229 ntBASIC7.28□□□□□ -1.24
MBD4O95243 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.28□□□□□ -1.24
MBD4O95243 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.28□□□□□ -1.24
MBD4O95243 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.28□□□□□ -1.24
MBD4O95243 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.28□□□□□ -1.24
MBD4O95243 OR5H7P-201ENST00000514084 930 ntBASIC7.28□□□□□ -1.24
MBD4O95243 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MBD4O95243 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.28□□□□□ -1.24
MBD4O95243 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.28□□□□□ -1.24
MBD4O95243 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
MBD4O95243 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.28□□□□□ -1.24
MBD4O95243 RPA2P1-201ENST00000556557 721 ntBASIC7.28□□□□□ -1.24
MBD4O95243 AC018558.5-201ENST00000565840 952 ntBASIC7.28□□□□□ -1.24
MBD4O95243 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.28□□□□□ -1.24
MBD4O95243 AC108673.3-201ENST00000609183 335 ntBASIC7.28□□□□□ -1.24
MBD4O95243 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.28□□□□□ -1.24
MBD4O95243 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.28□□□□□ -1.24
MBD4O95243 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
MBD4O95243 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MBD4O95243 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
MBD4O95243 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
MBD4O95243 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
MBD4O95243 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
MBD4O95243 AL078595.2-201ENST00000605309 1780 ntBASIC7.28□□□□□ -1.24
MBD4O95243 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
MBD4O95243 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
MBD4O95243 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
MBD4O95243 ZNF402P-201ENST00000404435 3100 ntBASIC7.27□□□□□ -1.24
MBD4O95243 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
MBD4O95243 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
MBD4O95243 SHQ1P1-201ENST00000437111 1544 ntBASIC7.27□□□□□ -1.25
MBD4O95243 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.27□□□□□ -1.25
MBD4O95243 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.27□□□□□ -1.25
MBD4O95243 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MBD4O95243 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.27□□□□□ -1.25
MBD4O95243 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MBD4O95243 RNA5SP273-201ENST00000362484 113 ntBASIC7.27□□□□□ -1.25
MBD4O95243 RNA5SP477-201ENST00000362639 119 ntBASIC7.27□□□□□ -1.25
MBD4O95243 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.27□□□□□ -1.25
MBD4O95243 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.27□□□□□ -1.25
MBD4O95243 AC007562.1-201ENST00000421819 517 ntBASIC7.27□□□□□ -1.25
MBD4O95243 TRIM60P16-201ENST00000444048 694 ntBASIC7.27□□□□□ -1.25
MBD4O95243 AC023274.2-201ENST00000445264 521 ntBASIC7.27□□□□□ -1.25
MBD4O95243 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.27□□□□□ -1.25
MBD4O95243 RPL12P24-201ENST00000474907 486 ntBASIC7.27□□□□□ -1.25
MBD4O95243 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.27□□□□□ -1.25
MBD4O95243 OR2A3P-201ENST00000493774 953 ntBASIC7.27□□□□□ -1.25
MBD4O95243 TRIM36-IT1-201ENST00000503723 881 ntBASIC7.27□□□□□ -1.25
MBD4O95243 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.27□□□□□ -1.25
MBD4O95243 AC006499.4-201ENST00000510947 694 ntBASIC7.27□□□□□ -1.25
MBD4O95243 RNA5SP116-201ENST00000516132 98 ntBASIC7.27□□□□□ -1.25
MBD4O95243 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.27□□□□□ -1.25
MBD4O95243 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.27□□□□□ -1.25
MBD4O95243 AC068305.2-201ENST00000550567 1205 ntBASIC7.27□□□□□ -1.25
MBD4O95243 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.27□□□□□ -1.25
MBD4O95243 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.27□□□□□ -1.25
MBD4O95243 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MBD4O95243 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.27□□□□□ -1.25
MBD4O95243 MIR4301-201ENST00000577203 66 ntBASIC7.27□□□□□ -1.25
MBD4O95243 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.27□□□□□ -1.25
MBD4O95243 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC7.27□□□□□ -1.25
MBD4O95243 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.27□□□□□ -1.25
MBD4O95243 AL365181.4-201ENST00000609800 547 ntBASIC7.27□□□□□ -1.25
MBD4O95243 MIR6809-201ENST00000612189 116 ntBASIC7.27□□□□□ -1.25
MBD4O95243 AC245014.3-201ENST00000618589 347 ntBASIC7.27□□□□□ -1.25
MBD4O95243 FO681491.1-202ENST00000623392 737 ntBASIC7.27□□□□□ -1.25
MBD4O95243 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.27□□□□□ -1.25
MBD4O95243 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MBD4O95243 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MBD4O95243 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.27□□□□□ -1.25
MBD4O95243 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MBD4O95243 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
MBD4O95243 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.26□□□□□ -1.25
MBD4O95243 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MBD4O95243 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.26□□□□□ -1.25
MBD4O95243 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MBD4O95243 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MBD4O95243 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MBD4O95243 AC006511.3-201ENST00000624929 1783 ntBASIC7.26□□□□□ -1.25
MBD4O95243 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
MBD4O95243 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.26□□□□□ -1.25
MBD4O95243 CDY11P-201ENST00000447168 1651 ntBASIC7.26□□□□□ -1.25
MBD4O95243 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.26□□□□□ -1.25
MBD4O95243 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.26□□□□□ -1.25
MBD4O95243 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MBD4O95243 AC120036.2-201ENST00000509729 1474 ntBASIC7.26□□□□□ -1.25
MBD4O95243 TMSB4XP2-201ENST00000335179 210 ntBASIC7.26□□□□□ -1.25
MBD4O95243 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.26□□□□□ -1.25
MBD4O95243 LYPLA1P3-201ENST00000402650 695 ntBASIC7.26□□□□□ -1.25
MBD4O95243 TMA16P2-201ENST00000413187 601 ntBASIC7.26□□□□□ -1.25
MBD4O95243 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.26□□□□□ -1.25
MBD4O95243 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.26□□□□□ -1.25
MBD4O95243 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.26□□□□□ -1.25
MBD4O95243 AL445466.1-201ENST00000448432 357 ntBASIC7.26□□□□□ -1.25
MBD4O95243 AC005077.1-201ENST00000449226 375 ntBASIC7.26□□□□□ -1.25
MBD4O95243 CFL1P4-201ENST00000451536 498 ntBASIC7.26□□□□□ -1.25
MBD4O95243 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.26□□□□□ -1.25
MBD4O95243 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.26□□□□□ -1.25
MBD4O95243 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.26□□□□□ -1.25
MBD4O95243 AP003396.4-201ENST00000527574 265 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms