Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AP002907.1-201ENST00000606361 1430 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 DDR2-201ENST00000367921 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL139020.1-203ENST00000556386 2738 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 MIR135B-201ENST00000362189 97 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 RNU1-5P-201ENST00000362684 144 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 SNORD56.4-201ENST00000363883 71 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 SNORA70.5-201ENST00000365519 135 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 MIR606-201ENST00000384851 96 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC009784.1-201ENST00000426484 460 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 Z98752.2-201ENST00000432727 312 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 GAPDHP48-201ENST00000436626 961 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL161454.1-201ENST00000446226 569 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC093799.1-201ENST00000452411 499 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 PMCHL2-203ENST00000457791 237 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC113367.2-201ENST00000505749 160 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC113352.1-201ENST00000513196 666 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AP000619.3-201ENST00000535634 1127 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC006960.3-201ENST00000561845 705 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 MTCO1P40-201ENST00000574371 625 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC015917.1-201ENST00000579654 510 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 RN7SL835P-201ENST00000579920 262 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC073091.2-201ENST00000603205 907 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL009028.1-201ENST00000604895 802 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC010680.4-201ENST00000605334 543 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC004908.2-201ENST00000609090 574 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC012360.2-201ENST00000609349 391 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL589666.2-201ENST00000624603 618 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC140479.4-205ENST00000636339 820 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC005722.2-201ENST00000577087 3370 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 RN7SKP23-201ENST00000625159 4301 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL512310.3-201ENST00000547023 1335 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL929601.4-201ENST00000613011 1341 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AL356289.3-201ENST00000640049 2669 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 HSPD1P11-201ENST00000508643 1702 ntBASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 ALG9-210ENST00000531154 1930 ntTSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 RPE-216ENST00000454822 2130 ntTSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 LINC01531-202ENST00000536898 3312 ntTSL 2 BASIC7.72□□□□□ -1.17
COL25A1Q9BXS0 AC095038.1-201ENST00000429248 1591 ntBASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC7.71□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms