Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TMEM97P2-201ENST00000517841 403 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGA1P17096 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGA1P17096 AC137695.1-201ENST00000604126 489 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 FAM27E4-201ENST00000605259 342 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 AC145423.1-201ENST00000605712 336 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 AP000894.4-201ENST00000610185 483 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGA1P17096 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HMGA1P17096 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HMGA1P17096 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGA1P17096 AL161901.1-201ENST00000624954 3425 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 AC010168.2-201ENST00000562691 5428 ntBASIC6.2□□□□□ -1.42
HMGA1P17096 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HMGA1P17096 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HMGA1P17096 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
HMGA1P17096 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGA1P17096 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HMGA1P17096 AC008957.3-201ENST00000624112 2242 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HMGA1P17096 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGA1P17096 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HMGA1P17096 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGA1P17096 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HMGA1P17096 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 AC005522.1-201ENST00000395416 346 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGA1P17096 RN7SKP286-201ENST00000410894 299 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 RN7SKP29-201ENST00000410957 272 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 MYL6P5-201ENST00000412707 459 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 SDHDP6-201ENST00000414693 480 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 RPL12P16-201ENST00000431098 498 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 AC242426.1-201ENST00000435270 960 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HMGA1P17096 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGA1P17096 RPS17P15-201ENST00000475609 349 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGA1P17096 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGA1P17096 AC008945.1-201ENST00000505144 499 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 GAPDHP71-201ENST00000511530 1003 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HMGA1P17096 AC112191.2-201ENST00000522428 333 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGA1P17096 AC010547.6-201ENST00000571789 193 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 SNORD95-201ENST00000579879 68 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGA1P17096 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 AC015802.2-201ENST00000589690 189 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGA1P17096 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGA1P17096 AC004836.1-201ENST00000623032 634 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGA1P17096 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGA1P17096 AC022919.1-201ENST00000624979 626 ntBASIC6.19□□□□□ -1.42
HMGA1P17096 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.19□□□□□ -1.42
HMGA1P17096 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
HMGA1P17096 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGA1P17096 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGA1P17096 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGA1P17096 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 FO393409.1-201ENST00000399325 1372 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGA1P17096 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGA1P17096 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HMGA1P17096 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 AL021877.2-201ENST00000624442 10684 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGA1P17096 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGA1P17096 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 Z95114.1-201ENST00000624264 14574 ntBASIC6.18□□□□□ -1.42
HMGA1P17096 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGA1P17096 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGA1P17096 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGA1P17096 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGA1P17096 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms