Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
AP1S1P61966 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AP1S1P61966 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
AP1S1P61966 AC009831.5-201ENST00000624000 3189 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.15□□□□□ -1.42
AP1S1P61966 AL355377.1-201ENST00000621125 1653 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AP1S1P61966 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.15□□□□□ -1.42
AP1S1P61966 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
AP1S1P61966 CXADRP1-201ENST00000398098 1095 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 AC016027.5-201ENST00000427227 210 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.15□□□□□ -1.42
AP1S1P61966 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.15□□□□□ -1.42
AP1S1P61966 ZNF619P1-201ENST00000446539 752 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 AC092865.4-201ENST00000477936 615 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.15□□□□□ -1.42
AP1S1P61966 AC114728.1-201ENST00000488289 483 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.15□□□□□ -1.42
AP1S1P61966 RBBP4P1-201ENST00000502424 1276 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.15□□□□□ -1.42
AP1S1P61966 AL158068.1-201ENST00000506116 616 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.15□□□□□ -1.42
AP1S1P61966 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.15□□□□□ -1.42
AP1S1P61966 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.15□□□□□ -1.42
AP1S1P61966 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.15□□□□□ -1.42
AP1S1P61966 AC090115.2-201ENST00000548060 883 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.15□□□□□ -1.42
AP1S1P61966 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.15□□□□□ -1.42
AP1S1P61966 CXADRP3-202ENST00000617265 1100 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 AC073488.3-201ENST00000631611 778 ntBASIC6.15□□□□□ -1.42
AP1S1P61966 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.15□□□□□ -1.42
AP1S1P61966 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
AP1S1P61966 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
AP1S1P61966 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.15□□□□□ -1.43
AP1S1P61966 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
AP1S1P61966 AL354854.1-201ENST00000455940 1363 ntBASIC6.15□□□□□ -1.43
AP1S1P61966 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.15□□□□□ -1.43
AP1S1P61966 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AP1S1P61966 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
AP1S1P61966 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
AP1S1P61966 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.14□□□□□ -1.43
AP1S1P61966 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
AP1S1P61966 AC008627.1-201ENST00000517511 1704 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.14□□□□□ -1.43
AP1S1P61966 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.14□□□□□ -1.43
AP1S1P61966 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
AP1S1P61966 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.14□□□□□ -1.43
AP1S1P61966 MIR130B-202ENST00000385018 82 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.14□□□□□ -1.43
AP1S1P61966 PTCD2P2-201ENST00000415579 1095 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
AP1S1P61966 AC069154.1-201ENST00000432914 542 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 AMYP1-201ENST00000440059 1023 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 CFL1P4-201ENST00000451536 498 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 PPIAP27-201ENST00000453800 265 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 Z83838.1-202ENST00000456225 839 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 AC098847.1-201ENST00000473094 348 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 LSM3P4-201ENST00000502948 309 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 TPM3P3-201ENST00000521343 354 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.14□□□□□ -1.43
AP1S1P61966 TOMM20P1-201ENST00000534518 427 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.14□□□□□ -1.43
AP1S1P61966 AC007494.1-201ENST00000562293 760 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 AC008507.3-201ENST00000585753 472 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.14□□□□□ -1.43
AP1S1P61966 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
AP1S1P61966 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
AP1S1P61966 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.14□□□□□ -1.43
AP1S1P61966 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.14□□□□□ -1.43
AP1S1P61966 AL117378.2-201ENST00000622916 1337 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 AC092724.1-201ENST00000624623 3397 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.14□□□□□ -1.43
AP1S1P61966 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
AP1S1P61966 AC016583.1-201ENST00000624221 2431 ntBASIC6.14□□□□□ -1.43
AP1S1P61966 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AP1S1P61966 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.14□□□□□ -1.43
AP1S1P61966 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
AP1S1P61966 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
AP1S1P61966 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
AP1S1P61966 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
AP1S1P61966 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
AP1S1P61966 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
AP1S1P61966 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
AP1S1P61966 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
AP1S1P61966 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
AP1S1P61966 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.13□□□□□ -1.43
AP1S1P61966 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
AP1S1P61966 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.13□□□□□ -1.43
AP1S1P61966 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
AP1S1P61966 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
AP1S1P61966 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
AP1S1P61966 RNA5SP433-201ENST00000364491 114 ntBASIC6.13□□□□□ -1.43
AP1S1P61966 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
AP1S1P61966 AL360271.1-201ENST00000395679 510 ntBASIC6.13□□□□□ -1.43
AP1S1P61966 RN7SKP166-201ENST00000410812 305 ntBASIC6.13□□□□□ -1.43
AP1S1P61966 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.13□□□□□ -1.43
AP1S1P61966 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.13□□□□□ -1.43
AP1S1P61966 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.13□□□□□ -1.43
AP1S1P61966 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms