Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.4□□□□□ -1.39
ATXN3P54252 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
ATXN3P54252 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.39
ATXN3P54252 BX284613.1-201ENST00000452221 1641 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.39□□□□□ -1.39
ATXN3P54252 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 FAM32BP-201ENST00000344033 333 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 AL031985.1-201ENST00000392713 418 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 RNA5SP178-201ENST00000410380 128 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 SLC20A1P1-201ENST00000413906 956 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.39□□□□□ -1.39
ATXN3P54252 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.39□□□□□ -1.39
ATXN3P54252 ATP5LP2-201ENST00000440646 311 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 AC097463.1-201ENST00000447288 481 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 PPIAP27-201ENST00000453800 265 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.39□□□□□ -1.39
ATXN3P54252 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 AC112184.1-201ENST00000505179 312 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 AL133399.1-201ENST00000527476 298 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 AC079905.1-201ENST00000549280 475 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.39□□□□□ -1.39
ATXN3P54252 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.39□□□□□ -1.39
ATXN3P54252 MIR4443-201ENST00000585052 53 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 AC100767.2-201ENST00000604840 693 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 AC097467.4-201ENST00000605504 141 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.39□□□□□ -1.39
ATXN3P54252 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.39□□□□□ -1.39
ATXN3P54252 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.39□□□□□ -1.39
ATXN3P54252 HCFC2P1-201ENST00000392864 1592 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATXN3P54252 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.39□□□□□ -1.39
ATXN3P54252 CDY11P-201ENST00000447168 1651 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 AC005332.9-201ENST00000620266 2921 ntBASIC6.39□□□□□ -1.39
ATXN3P54252 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.39□□□□□ -1.39
ATXN3P54252 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
ATXN3P54252 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATXN3P54252 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.38□□□□□ -1.39
ATXN3P54252 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATXN3P54252 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.38□□□□□ -1.39
ATXN3P54252 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATXN3P54252 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATXN3P54252 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATXN3P54252 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
ATXN3P54252 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATXN3P54252 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATXN3P54252 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.38□□□□□ -1.39
ATXN3P54252 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATXN3P54252 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.38□□□□□ -1.39
ATXN3P54252 AC066692.1-201ENST00000421721 457 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ATXN3P54252 AC007568.1-201ENST00000422912 471 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.38□□□□□ -1.39
ATXN3P54252 AL355355.1-201ENST00000442900 793 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.38□□□□□ -1.39
ATXN3P54252 AC135999.1-201ENST00000478962 479 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 PPIAP19-201ENST00000486414 492 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.38□□□□□ -1.39
ATXN3P54252 LDHAP1-201ENST00000509421 992 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 AC006499.4-201ENST00000510947 694 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 PRMT5P1-201ENST00000514351 598 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 SCARNA5-201ENST00000516201 276 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 RN7SKP35-201ENST00000517210 151 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.38□□□□□ -1.39
ATXN3P54252 IGHV3-57-201ENST00000520143 280 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATXN3P54252 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.38□□□□□ -1.39
ATXN3P54252 AC007346.1-201ENST00000569208 867 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 AC090286.3-201ENST00000573133 187 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
ATXN3P54252 MIR6768-201ENST00000610734 72 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.38□□□□□ -1.39
ATXN3P54252 AC005277.2-201ENST00000617898 390 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 AC024884.1-201ENST00000620583 399 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.38□□□□□ -1.39
ATXN3P54252 AC103703.1-201ENST00000634783 663 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ATXN3P54252 TTC41P-205ENST00000551270 3963 ntBASIC6.38□□□□□ -1.39
ATXN3P54252 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.38□□□□□ -1.39
ATXN3P54252 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
ATXN3P54252 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms