Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.36□□□□□ -1.39
RETP07949 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
RETP07949 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 AL513325.1-201ENST00000417716 1034 ntBASIC6.36□□□□□ -1.39
RETP07949 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.36□□□□□ -1.39
RETP07949 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.36□□□□□ -1.39
RETP07949 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.36□□□□□ -1.39
RETP07949 AC130360.1-201ENST00000425489 1117 ntBASIC6.36□□□□□ -1.39
RETP07949 MED28P4-201ENST00000433137 572 ntBASIC6.36□□□□□ -1.39
RETP07949 SOCS5P1-201ENST00000440415 949 ntBASIC6.36□□□□□ -1.39
RETP07949 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.36□□□□□ -1.39
RETP07949 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.36□□□□□ -1.39
RETP07949 CST12P-201ENST00000457644 362 ntBASIC6.36□□□□□ -1.39
RETP07949 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.36□□□□□ -1.39
RETP07949 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.36□□□□□ -1.39
RETP07949 IGHV3-57-201ENST00000520143 280 ntBASIC6.36□□□□□ -1.39
RETP07949 IGLV2-28-201ENST00000520681 304 ntBASIC6.36□□□□□ -1.39
RETP07949 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.36□□□□□ -1.39
RETP07949 IGLV3-6-201ENST00000523937 250 ntBASIC6.36□□□□□ -1.39
RETP07949 AC130365.2-201ENST00000525882 1201 ntBASIC6.36□□□□□ -1.39
RETP07949 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.36□□□□□ -1.39
RETP07949 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.36□□□□□ -1.39
RETP07949 RPA2P1-201ENST00000556557 721 ntBASIC6.36□□□□□ -1.39
RETP07949 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.36□□□□□ -1.39
RETP07949 MIR4489-201ENST00000578869 62 ntBASIC6.36□□□□□ -1.39
RETP07949 MIR1273E-201ENST00000581165 102 ntBASIC6.36□□□□□ -1.39
RETP07949 AC073046.2-201ENST00000604756 527 ntBASIC6.36□□□□□ -1.39
RETP07949 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 AC005393.1-201ENST00000617916 584 ntBASIC6.36□□□□□ -1.39
RETP07949 AC012653.2-201ENST00000621880 420 ntBASIC6.36□□□□□ -1.39
RETP07949 MIR6719-201ENST00000622428 87 ntBASIC6.36□□□□□ -1.39
RETP07949 AC012254.5-201ENST00000623573 478 ntBASIC6.36□□□□□ -1.39
RETP07949 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.36□□□□□ -1.39
RETP07949 AC073365.1-203ENST00000641055 1992 ntBASIC6.36□□□□□ -1.39
RETP07949 AC011504.1-201ENST00000623331 4103 ntBASIC6.36□□□□□ -1.39
RETP07949 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.36□□□□□ -1.39
RETP07949 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RETP07949 OLMALINC-203ENST00000641087 3779 ntBASIC6.36□□□□□ -1.39
RETP07949 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.35□□□□□ -1.39
RETP07949 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RETP07949 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.35□□□□□ -1.39
RETP07949 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RETP07949 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.35□□□□□ -1.39
RETP07949 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RETP07949 AC125238.2-201ENST00000430003 1440 ntBASIC6.35□□□□□ -1.39
RETP07949 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RETP07949 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.35□□□□□ -1.39
RETP07949 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.35□□□□□ -1.39
RETP07949 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
RETP07949 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
RETP07949 RNA5SP273-201ENST00000362484 113 ntBASIC6.35□□□□□ -1.39
RETP07949 AP003170.5-201ENST00000397185 335 ntBASIC6.35□□□□□ -1.39
RETP07949 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.35□□□□□ -1.39
RETP07949 SDHDP6-201ENST00000414693 480 ntBASIC6.35□□□□□ -1.39
RETP07949 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.35□□□□□ -1.39
RETP07949 AL163193.1-201ENST00000444895 788 ntBASIC6.35□□□□□ -1.39
RETP07949 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.35□□□□□ -1.39
RETP07949 Y_RNA.667-201ENST00000516212 107 ntBASIC6.35□□□□□ -1.39
RETP07949 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.35□□□□□ -1.39
RETP07949 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.35□□□□□ -1.39
RETP07949 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RETP07949 HMGN2P47-201ENST00000559378 272 ntBASIC6.35□□□□□ -1.39
RETP07949 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.35□□□□□ -1.39
RETP07949 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.35□□□□□ -1.39
RETP07949 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.35□□□□□ -1.39
RETP07949 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.35□□□□□ -1.39
RETP07949 AC018692.2-201ENST00000624130 348 ntBASIC6.35□□□□□ -1.39
RETP07949 AP000577.1-201ENST00000624366 878 ntBASIC6.35□□□□□ -1.39
RETP07949 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RETP07949 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RETP07949 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.35□□□□□ -1.39
RETP07949 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
RETP07949 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RETP07949 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
RETP07949 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.35□□□□□ -1.39
RETP07949 AC083837.1-201ENST00000565297 2994 ntBASIC6.35□□□□□ -1.39
RETP07949 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RETP07949 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.35□□□□□ -1.39
RETP07949 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.35□□□□□ -1.39
RETP07949 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RETP07949 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RETP07949 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.34□□□□□ -1.39
RETP07949 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RETP07949 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RETP07949 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RETP07949 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.34□□□□□ -1.39
RETP07949 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RETP07949 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RETP07949 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RETP07949 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RETP07949 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
RETP07949 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RETP07949 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms