Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 RNU105B-201ENST00000364478 208 ntBASIC5.65□□□□□ -1.5
CHD8Q9HCK8 AC009804.1-201ENST00000400949 179 ntBASIC5.65□□□□□ -1.5
CHD8Q9HCK8 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 AC114755.4-201ENST00000439114 443 ntBASIC5.65□□□□□ -1.5
CHD8Q9HCK8 RN7SL269P-201ENST00000467795 305 ntBASIC5.65□□□□□ -1.5
CHD8Q9HCK8 AC092324.1-201ENST00000468671 324 ntBASIC5.65□□□□□ -1.5
CHD8Q9HCK8 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 AC009163.6-201ENST00000612367 342 ntBASIC5.65□□□□□ -1.5
CHD8Q9HCK8 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.65□□□□□ -1.5
CHD8Q9HCK8 MIR8080-201ENST00000622224 89 ntBASIC5.65□□□□□ -1.5
CHD8Q9HCK8 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 CASC19-228ENST00000641414 1684 ntBASIC5.65□□□□□ -1.5
CHD8Q9HCK8 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 AC110998.1-201ENST00000519029 2053 ntBASIC5.65□□□□□ -1.5
CHD8Q9HCK8 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CHD8Q9HCK8 AC068538.1-201ENST00000376856 336 ntBASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AL049697.3-201ENST00000406493 982 ntBASIC5.65□□□□□ -1.51
CHD8Q9HCK8 HMGA1P8-201ENST00000414130 321 ntBASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AC008280.1-201ENST00000418851 412 ntBASIC5.65□□□□□ -1.51
CHD8Q9HCK8 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AL360081.1-201ENST00000428299 555 ntBASIC5.65□□□□□ -1.51
CHD8Q9HCK8 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 PPIAP10-201ENST00000438675 458 ntBASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AC106800.3-201ENST00000511389 308 ntBASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AP001858.2-201ENST00000536213 601 ntBASIC5.65□□□□□ -1.51
CHD8Q9HCK8 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AL023806.3-201ENST00000638502 2704 ntBASIC5.65□□□□□ -1.51
CHD8Q9HCK8 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
CHD8Q9HCK8 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 OR51A10P-201ENST00000307165 937 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 RNA5SP339-201ENST00000390987 122 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 RN7SKP166-201ENST00000410812 305 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 AL445466.1-201ENST00000448432 357 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 PGAM1P13-201ENST00000507497 754 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 SCARNA13-201ENST00000516672 275 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 AC120057.5-201ENST00000623840 154 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 AC104964.2-201ENST00000562242 4641 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 THADA-202ENST00000402360 2974 ntTSL 5 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 RNU1-32P-201ENST00000363937 159 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 SNORA43.1-201ENST00000364863 140 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 OFD1P10Y-201ENST00000434110 1433 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 Y_RNA.710-201ENST00000516975 110 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 MIR3934-201ENST00000579806 107 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 AL645933.2-201ENST00000606743 1207 ntBASIC5.64□□□□□ -1.51
CHD8Q9HCK8 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 APP-206ENST00000359726 3294 ntTSL 2 BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CHD8Q9HCK8 AC011008.2-201ENST00000624866 3352 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms