Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC012254.5-201ENST00000623573 478 ntBASIC9.79□□□□□ -0.84
IFT140Q96RY7 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
IFT140Q96RY7 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
IFT140Q96RY7 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC9.78□□□□□ -0.84
IFT140Q96RY7 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
IFT140Q96RY7 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 EEF1A1P24-201ENST00000451469 1378 ntBASIC9.78□□□□□ -0.84
IFT140Q96RY7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
IFT140Q96RY7 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC9.78□□□□□ -0.84
IFT140Q96RY7 SDC4P-201ENST00000453285 601 ntBASIC9.78□□□□□ -0.84
IFT140Q96RY7 AL035090.1-201ENST00000454835 332 ntBASIC9.78□□□□□ -0.84
IFT140Q96RY7 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC9.78□□□□□ -0.84
IFT140Q96RY7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC9.78□□□□□ -0.84
IFT140Q96RY7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC9.78□□□□□ -0.84
IFT140Q96RY7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC9.78□□□□□ -0.84
IFT140Q96RY7 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.78□□□□□ -0.84
IFT140Q96RY7 OR4A42P-201ENST00000531397 938 ntBASIC9.78□□□□□ -0.84
IFT140Q96RY7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC9.78□□□□□ -0.84
IFT140Q96RY7 AL390318.1-201ENST00000624564 687 ntBASIC9.78□□□□□ -0.84
IFT140Q96RY7 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
IFT140Q96RY7 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
IFT140Q96RY7 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
IFT140Q96RY7 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
IFT140Q96RY7 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
IFT140Q96RY7 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
IFT140Q96RY7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 RPL26P29-201ENST00000415623 438 ntBASIC9.77□□□□□ -0.85
IFT140Q96RY7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
IFT140Q96RY7 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
IFT140Q96RY7 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC9.77□□□□□ -0.85
IFT140Q96RY7 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
IFT140Q96RY7 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC9.76□□□□□ -0.85
IFT140Q96RY7 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 GTF2IP4-201ENST00000453092 2054 ntBASIC9.76□□□□□ -0.85
IFT140Q96RY7 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
IFT140Q96RY7 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 HIST1H3PS1-201ENST00000404612 417 ntBASIC9.76□□□□□ -0.85
IFT140Q96RY7 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 AC108075.1-201ENST00000424692 529 ntBASIC9.76□□□□□ -0.85
IFT140Q96RY7 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC9.76□□□□□ -0.85
IFT140Q96RY7 GYG1P1-201ENST00000460864 698 ntBASIC9.76□□□□□ -0.85
IFT140Q96RY7 RPEP1-201ENST00000504507 658 ntBASIC9.76□□□□□ -0.85
IFT140Q96RY7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC9.76□□□□□ -0.85
IFT140Q96RY7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC9.76□□□□□ -0.85
IFT140Q96RY7 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC9.76□□□□□ -0.85
IFT140Q96RY7 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC9.76□□□□□ -0.85
IFT140Q96RY7 AC003992.1-201ENST00000635364 557 ntBASIC9.76□□□□□ -0.85
IFT140Q96RY7 AC092692.1-201ENST00000623625 2595 ntBASIC9.76□□□□□ -0.85
IFT140Q96RY7 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.76□□□□□ -0.85
IFT140Q96RY7 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
IFT140Q96RY7 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC9.76□□□□□ -0.85
IFT140Q96RY7 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
IFT140Q96RY7 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
IFT140Q96RY7 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
IFT140Q96RY7 RNA5SP305-201ENST00000362665 119 ntBASIC9.75□□□□□ -0.85
IFT140Q96RY7 PTCD2P2-201ENST00000415579 1095 ntBASIC9.75□□□□□ -0.85
IFT140Q96RY7 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 AC099521.1-201ENST00000482557 334 ntBASIC9.75□□□□□ -0.85
IFT140Q96RY7 AP000662.1-201ENST00000530952 487 ntBASIC9.75□□□□□ -0.85
IFT140Q96RY7 AC011840.5-201ENST00000582125 771 ntBASIC9.75□□□□□ -0.85
IFT140Q96RY7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC9.75□□□□□ -0.85
IFT140Q96RY7 AC063977.5-201ENST00000601044 974 ntBASIC9.75□□□□□ -0.85
IFT140Q96RY7 FAM25E-202ENST00000608562 189 ntBASIC9.75□□□□□ -0.85
IFT140Q96RY7 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms