Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 NRBF2P2-201ENST00000413087 861 ntBASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 OR11I1P-201ENST00000486033 954 ntBASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 BTF3P13-201ENST00000513224 490 ntBASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AL035419.1-201ENST00000397037 564 ntBASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC126120.1-201ENST00000431082 470 ntBASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC073648.4-201ENST00000442655 781 ntBASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC019185.1-201ENST00000442718 389 ntBASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 RN7SL41P-201ENST00000476144 297 ntBASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 DPCR1-203ENST00000636043 5587 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 PAX6-231ENST00000606377 6901 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 HS6ST3-202ENST00000620595 7073 ntBASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CSMD1Q96PZ7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 RNA5SP91-201ENST00000390902 119 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AL389915.1-201ENST00000422463 466 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC063977.5-201ENST00000601044 974 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AL390318.1-201ENST00000624564 687 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC026951.1-201ENST00000559530 2459 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC245028.1-201ENST00000423259 256 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 SAMM50P1-201ENST00000455403 1399 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 ZNF658B-201ENST00000602828 3408 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AL118522.2-201ENST00000616045 615 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 RNA5SP319-201ENST00000362768 119 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC068138.1-201ENST00000412635 217 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC016712.1-201ENST00000431088 378 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 RN7SL57P-201ENST00000493687 290 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC092375.1-201ENST00000550410 637 ntBASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.91□□□□□ -1.62
CSMD1Q96PZ7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms