Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AP002370.1-201ENST00000528055 1602 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 OR10R3P-201ENST00000361688 942 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AL356981.1-201ENST00000454879 684 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AC073610.1-201ENST00000489971 396 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AL022394.1-201ENST00000606979 292 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AC087516.1-201ENST00000561236 2428 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 WBP11P1-201ENST00000562560 1931 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AP001541.1-201ENST00000623322 1904 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 DUTP5-201ENST00000406790 469 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AL450023.1-201ENST00000450868 751 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 RN7SL591P-201ENST00000496150 292 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 HMGB1P42-201ENST00000532126 553 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 RPA2P3-201ENST00000533268 770 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 SPATA31B1P-201ENST00000434692 4016 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 AC112255.1-201ENST00000624070 2493 ntBASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ALMS1Q8TCU4 SPATA31D5P-201ENST00000376459 4784 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 RNU11-6P-201ENST00000391127 133 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC245047.1-201ENST00000433276 873 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 CYCSP12-201ENST00000437729 300 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 TPT1P12-201ENST00000448968 492 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 OR2AO1P-201ENST00000476497 403 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 PGAM1P13-201ENST00000507497 754 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC109481.1-201ENST00000509173 282 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 SRRM1P3-201ENST00000426911 2678 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC022034.1-201ENST00000512867 2156 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC4□□□□□ -1.77
ALMS1Q8TCU4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4□□□□□ -1.77
ALMS1Q8TCU4 RAB28P1-201ENST00000411517 641 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 RPS29P33-201ENST00000456717 146 ntBASIC4□□□□□ -1.77
ALMS1Q8TCU4 AC091965.3-201ENST00000506236 208 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms