Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 RNU6-152P-201ENST00000384037 107 ntBASIC6.68□□□□□ -1.34
COPAP53621 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.68□□□□□ -1.34
COPAP53621 AC093166.3-201ENST00000448785 303 ntBASIC6.68□□□□□ -1.34
COPAP53621 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 RN7SL561P-201ENST00000488553 281 ntBASIC6.68□□□□□ -1.34
COPAP53621 OR9N1P-201ENST00000491296 333 ntBASIC6.68□□□□□ -1.34
COPAP53621 NPM1P28-201ENST00000492269 840 ntBASIC6.68□□□□□ -1.34
COPAP53621 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.68□□□□□ -1.34
COPAP53621 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.68□□□□□ -1.34
COPAP53621 NPM1P52-201ENST00000518264 846 ntBASIC6.68□□□□□ -1.34
COPAP53621 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.68□□□□□ -1.34
COPAP53621 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.68□□□□□ -1.34
COPAP53621 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.68□□□□□ -1.34
COPAP53621 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.68□□□□□ -1.34
COPAP53621 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.68□□□□□ -1.34
COPAP53621 AC010547.7-201ENST00000570323 333 ntBASIC6.68□□□□□ -1.34
COPAP53621 SYPL1P2-201ENST00000582878 727 ntBASIC6.68□□□□□ -1.34
COPAP53621 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.68□□□□□ -1.34
COPAP53621 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.68□□□□□ -1.34
COPAP53621 AC004805.3-201ENST00000603178 310 ntBASIC6.68□□□□□ -1.34
COPAP53621 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.68□□□□□ -1.34
COPAP53621 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 AC084036.1-201ENST00000609190 508 ntBASIC6.68□□□□□ -1.34
COPAP53621 AC119674.1-220ENST00000641502 1048 ntBASIC6.68□□□□□ -1.34
COPAP53621 CASC19-274ENST00000642018 970 ntBASIC6.68□□□□□ -1.34
COPAP53621 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
COPAP53621 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 AL731556.1-201ENST00000394628 3711 ntBASIC6.68□□□□□ -1.34
COPAP53621 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.68□□□□□ -1.34
COPAP53621 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.68□□□□□ -1.34
COPAP53621 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 AC005702.3-201ENST00000585345 1447 ntBASIC6.67□□□□□ -1.34
COPAP53621 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPAP53621 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPAP53621 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COPAP53621 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPAP53621 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPAP53621 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
COPAP53621 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COPAP53621 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPAP53621 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPAP53621 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.67□□□□□ -1.34
COPAP53621 RNA5SP485-201ENST00000365053 119 ntBASIC6.67□□□□□ -1.34
COPAP53621 AL391419.1-201ENST00000398901 1275 ntBASIC6.67□□□□□ -1.34
COPAP53621 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
COPAP53621 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.67□□□□□ -1.34
COPAP53621 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.67□□□□□ -1.34
COPAP53621 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.67□□□□□ -1.34
COPAP53621 VN1R20P-201ENST00000425215 966 ntBASIC6.67□□□□□ -1.34
COPAP53621 GAPDHP59-201ENST00000435908 267 ntBASIC6.67□□□□□ -1.34
COPAP53621 RPL5P10-201ENST00000445207 894 ntBASIC6.67□□□□□ -1.34
COPAP53621 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.67□□□□□ -1.34
COPAP53621 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.67□□□□□ -1.34
COPAP53621 SULT1D1P-201ENST00000458020 882 ntBASIC6.67□□□□□ -1.34
COPAP53621 AC104849.1-201ENST00000462623 405 ntBASIC6.67□□□□□ -1.34
COPAP53621 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.67□□□□□ -1.34
COPAP53621 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COPAP53621 AC018645.1-201ENST00000505003 109 ntBASIC6.67□□□□□ -1.34
COPAP53621 AC113367.2-201ENST00000505749 160 ntBASIC6.67□□□□□ -1.34
COPAP53621 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COPAP53621 SETP12-201ENST00000514068 805 ntBASIC6.67□□□□□ -1.34
COPAP53621 AC011853.1-201ENST00000518911 454 ntBASIC6.67□□□□□ -1.34
COPAP53621 KCTD9P4-201ENST00000526766 1166 ntBASIC6.67□□□□□ -1.34
COPAP53621 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPAP53621 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.67□□□□□ -1.34
COPAP53621 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.67□□□□□ -1.34
COPAP53621 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.67□□□□□ -1.34
COPAP53621 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.67□□□□□ -1.34
COPAP53621 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.67□□□□□ -1.34
COPAP53621 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.67□□□□□ -1.34
COPAP53621 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.67□□□□□ -1.34
COPAP53621 AL158211.2-201ENST00000607282 395 ntBASIC6.67□□□□□ -1.34
COPAP53621 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.67□□□□□ -1.34
COPAP53621 MIR6721-201ENST00000617181 87 ntBASIC6.67□□□□□ -1.34
COPAP53621 AC026367.3-201ENST00000619032 590 ntBASIC6.67□□□□□ -1.34
COPAP53621 FO681491.1-202ENST00000623392 737 ntBASIC6.67□□□□□ -1.34
COPAP53621 AC073592.6-201ENST00000624271 415 ntBASIC6.67□□□□□ -1.34
COPAP53621 AP000577.1-201ENST00000624366 878 ntBASIC6.67□□□□□ -1.34
COPAP53621 AC114546.4-201ENST00000624413 369 ntBASIC6.67□□□□□ -1.34
COPAP53621 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COPAP53621 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.67□□□□□ -1.34
COPAP53621 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
COPAP53621 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms