Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
BRCC3P46736 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BRCC3P46736 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
BRCC3P46736 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
BRCC3P46736 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
BRCC3P46736 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
BRCC3P46736 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
BRCC3P46736 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
BRCC3P46736 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.51□□□□□ -1.37
BRCC3P46736 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.51□□□□□ -1.37
BRCC3P46736 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
BRCC3P46736 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
BRCC3P46736 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCC3P46736 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCC3P46736 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.5□□□□□ -1.37
BRCC3P46736 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCC3P46736 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.5□□□□□ -1.37
BRCC3P46736 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCC3P46736 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BRCC3P46736 AC092642.1-201ENST00000392417 425 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.5□□□□□ -1.37
BRCC3P46736 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.5□□□□□ -1.37
BRCC3P46736 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BRCC3P46736 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCC3P46736 PCBP2P1-201ENST00000437262 977 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCC3P46736 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.5□□□□□ -1.37
BRCC3P46736 TRIM60P16-201ENST00000444048 694 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.5□□□□□ -1.37
BRCC3P46736 AC016027.4-201ENST00000450866 277 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 RN7SL221P-201ENST00000466190 281 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 RN7SL269P-201ENST00000467795 305 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 UBFD1P1-201ENST00000473259 814 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 AC104109.1-201ENST00000498563 436 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 AC073581.1-201ENST00000519036 575 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 AC022826.1-201ENST00000519383 805 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.5□□□□□ -1.37
BRCC3P46736 AP005639.1-201ENST00000526939 192 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCC3P46736 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.5□□□□□ -1.37
BRCC3P46736 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BRCC3P46736 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCC3P46736 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
BRCC3P46736 AC005244.1-201ENST00000582566 339 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.5□□□□□ -1.37
BRCC3P46736 AC067852.5-201ENST00000589299 310 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCC3P46736 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.5□□□□□ -1.37
BRCC3P46736 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BRCC3P46736 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCC3P46736 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
BRCC3P46736 AC096921.2-201ENST00000561507 1916 ntBASIC6.5□□□□□ -1.37
BRCC3P46736 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
BRCC3P46736 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
BRCC3P46736 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
BRCC3P46736 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
BRCC3P46736 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.5□□□□□ -1.37
BRCC3P46736 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.5□□□□□ -1.37
BRCC3P46736 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
BRCC3P46736 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
BRCC3P46736 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.49□□□□□ -1.37
BRCC3P46736 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
BRCC3P46736 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.49□□□□□ -1.37
BRCC3P46736 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 RPL35AP3-201ENST00000414680 288 ntBASIC6.49□□□□□ -1.37
BRCC3P46736 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.49□□□□□ -1.37
BRCC3P46736 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.49□□□□□ -1.37
BRCC3P46736 RNA5SP116-201ENST00000516132 98 ntBASIC6.49□□□□□ -1.37
BRCC3P46736 SCARNA18.1-201ENST00000516330 83 ntBASIC6.49□□□□□ -1.37
BRCC3P46736 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.49□□□□□ -1.37
BRCC3P46736 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.49□□□□□ -1.37
BRCC3P46736 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.49□□□□□ -1.37
BRCC3P46736 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.49□□□□□ -1.37
BRCC3P46736 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.49□□□□□ -1.37
BRCC3P46736 AC018558.5-201ENST00000565840 952 ntBASIC6.49□□□□□ -1.37
BRCC3P46736 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 AC020916.2-201ENST00000591242 360 ntBASIC6.49□□□□□ -1.37
BRCC3P46736 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 AL021368.3-201ENST00000607119 578 ntBASIC6.49□□□□□ -1.37
BRCC3P46736 MIR6793-201ENST00000612376 63 ntBASIC6.49□□□□□ -1.37
BRCC3P46736 TCL6_3.1-201ENST00000619064 137 ntBASIC6.49□□□□□ -1.37
BRCC3P46736 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 AC003992.1-201ENST00000635364 557 ntBASIC6.49□□□□□ -1.37
BRCC3P46736 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms