Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NPIPA3F8WFD2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC027575.3-201ENST00000583058 2747 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AL157831.2-201ENST00000564681 3095 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC119674.1-213ENST00000641177 1386 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 COX6B1P3-201ENST00000312310 260 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 RNA5SP122-201ENST00000384457 108 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC004386.1-201ENST00000393214 761 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 BX119904.3-201ENST00000428194 957 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AL389925.1-201ENST00000432257 728 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 IGLV3-4-201ENST00000432300 244 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 SOCS5P1-201ENST00000440415 949 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AL157385.1-201ENST00000446973 268 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 FCF1P7-201ENST00000451185 558 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC016724.1-201ENST00000453215 421 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 SNX18P26-201ENST00000458433 740 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 RPL12P31-201ENST00000478433 450 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC135999.1-201ENST00000478962 479 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC233702.7-202ENST00000582941 211 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AL683813.2-201ENST00000605245 502 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AL352984.2-201ENST00000611153 546 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 LYARP1-201ENST00000436977 1501 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC007406.5-201ENST00000570140 3170 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AC093225.1-201ENST00000506867 1408 ntBASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NPIPA3F8WFD2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA3F8WFD2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.71□□□□□ -1.49
NPIPA3F8WFD2 AL391261.1-201ENST00000555712 1479 ntBASIC5.71□□□□□ -1.49
NPIPA3F8WFD2 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.71□□□□□ -1.49
NPIPA3F8WFD2 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA3F8WFD2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA3F8WFD2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA3F8WFD2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
NPIPA3F8WFD2 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 RNA5SP478-201ENST00000364657 115 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 RN7SKP15-201ENST00000364742 309 ntBASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.71□□□□□ -1.5
NPIPA3F8WFD2 RN7SKP144-201ENST00000411108 279 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms