Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CDH6P55285 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDH6P55285 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
CDH6P55285 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDH6P55285 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CDH6P55285 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDH6P55285 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH6P55285 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.34□□□□□ -1.39
CDH6P55285 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CDH6P55285 RPL23AP17-201ENST00000401064 499 ntBASIC6.34□□□□□ -1.39
CDH6P55285 RPL7P58-201ENST00000402913 758 ntBASIC6.34□□□□□ -1.39
CDH6P55285 RNA5SP156-201ENST00000410250 110 ntBASIC6.34□□□□□ -1.39
CDH6P55285 RNU4-64P-201ENST00000410795 131 ntBASIC6.34□□□□□ -1.39
CDH6P55285 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH6P55285 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH6P55285 AL590004.3-202ENST00000445883 451 ntBASIC6.34□□□□□ -1.39
CDH6P55285 RPL23AP60-201ENST00000450011 454 ntBASIC6.34□□□□□ -1.39
CDH6P55285 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDH6P55285 RPL12P30-201ENST00000488389 499 ntBASIC6.34□□□□□ -1.39
CDH6P55285 RN7SL362P-201ENST00000494228 267 ntBASIC6.34□□□□□ -1.39
CDH6P55285 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH6P55285 AC113367.2-201ENST00000505749 160 ntBASIC6.34□□□□□ -1.39
CDH6P55285 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.34□□□□□ -1.39
CDH6P55285 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH6P55285 AC008429.4-201ENST00000521201 182 ntBASIC6.34□□□□□ -1.39
CDH6P55285 AC036111.2-201ENST00000533247 901 ntBASIC6.34□□□□□ -1.39
CDH6P55285 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH6P55285 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH6P55285 AC018690.1-201ENST00000608144 626 ntBASIC6.34□□□□□ -1.39
CDH6P55285 uc_338.29-201ENST00000615099 168 ntBASIC6.34□□□□□ -1.39
CDH6P55285 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH6P55285 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH6P55285 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
CDH6P55285 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDH6P55285 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDH6P55285 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.34□□□□□ -1.4
CDH6P55285 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.4
CDH6P55285 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CDH6P55285 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CDH6P55285 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 PTCD2P2-201ENST00000415579 1095 ntBASIC6.33□□□□□ -1.4
CDH6P55285 AL359885.1-201ENST00000415786 903 ntBASIC6.33□□□□□ -1.4
CDH6P55285 RPS7P8-201ENST00000418311 581 ntBASIC6.33□□□□□ -1.4
CDH6P55285 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH6P55285 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.33□□□□□ -1.4
CDH6P55285 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.33□□□□□ -1.4
CDH6P55285 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH6P55285 AL512593.1-201ENST00000444758 779 ntBASIC6.33□□□□□ -1.4
CDH6P55285 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.33□□□□□ -1.4
CDH6P55285 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.33□□□□□ -1.4
CDH6P55285 AC124945.1-201ENST00000485133 188 ntBASIC6.33□□□□□ -1.4
CDH6P55285 AC092349.1-201ENST00000504903 310 ntBASIC6.33□□□□□ -1.4
CDH6P55285 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH6P55285 RNA5SP434-201ENST00000516647 121 ntBASIC6.33□□□□□ -1.4
CDH6P55285 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.33□□□□□ -1.4
CDH6P55285 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH6P55285 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 AL078601.3-201ENST00000573303 535 ntBASIC6.33□□□□□ -1.4
CDH6P55285 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 AL135999.3-201ENST00000610501 812 ntBASIC6.33□□□□□ -1.4
CDH6P55285 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CDH6P55285 AC048341.3-201ENST00000619323 491 ntBASIC6.33□□□□□ -1.4
CDH6P55285 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH6P55285 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CDH6P55285 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH6P55285 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CDH6P55285 AC022325.1-201ENST00000502748 2199 ntBASIC6.33□□□□□ -1.4
CDH6P55285 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
CDH6P55285 AC114876.1-201ENST00000490962 1366 ntBASIC6.32□□□□□ -1.4
CDH6P55285 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH6P55285 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH6P55285 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH6P55285 SNX18P3-202ENST00000565670 1750 ntBASIC6.32□□□□□ -1.4
CDH6P55285 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH6P55285 IMMTP1-201ENST00000435590 2219 ntBASIC6.32□□□□□ -1.4
CDH6P55285 AC073365.1-203ENST00000641055 1992 ntBASIC6.32□□□□□ -1.4
CDH6P55285 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH6P55285 RNU1-59P-201ENST00000364829 162 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms