Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
TRIM23P36406 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
TRIM23P36406 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM23P36406 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM23P36406 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM23P36406 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM23P36406 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM23P36406 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM23P36406 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM23P36406 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM23P36406 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM23P36406 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM23P36406 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM23P36406 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM23P36406 OR7E156P-201ENST00000400303 464 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM23P36406 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM23P36406 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM23P36406 RPSAP41-201ENST00000439695 860 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 CT45A11P-201ENST00000448043 1134 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM23P36406 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM23P36406 RNA5SP434-201ENST00000516647 121 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 IGKV3D-25-201ENST00000519599 235 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM23P36406 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM23P36406 IGHV1-14-201ENST00000523391 241 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM23P36406 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM23P36406 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM23P36406 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM23P36406 DYNLL1P1-201ENST00000595442 269 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM23P36406 AC079315.1-201ENST00000602952 623 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 AC006924.1-201ENST00000610750 559 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 MIR6071-201ENST00000616741 78 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 FAM27E2-201ENST00000619668 403 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM23P36406 AC018717.1-201ENST00000457712 1505 ntBASIC6.18□□□□□ -1.42
TRIM23P36406 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
TRIM23P36406 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM23P36406 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM23P36406 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM23P36406 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM23P36406 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM23P36406 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM23P36406 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TRIM23P36406 QRSL1P1-201ENST00000400977 1540 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM23P36406 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TRIM23P36406 COX6B1P3-201ENST00000312310 260 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 SNORA21-201ENST00000362423 132 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 RN7SKP275-201ENST00000364626 301 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 SNORA51.9-201ENST00000384295 124 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 U3.23-201ENST00000391132 200 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM23P36406 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM23P36406 AC130360.1-201ENST00000425489 1117 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM23P36406 AC110602.1-201ENST00000437414 318 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 AMYP1-201ENST00000440059 1023 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 RPL6P30-201ENST00000443382 862 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 RBMY2AP-201ENST00000445405 1157 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 RBMY2CP-201ENST00000448575 1157 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 RBMY2DP-202ENST00000448881 1157 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 PPIAP7-201ENST00000454070 489 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 RANP2-201ENST00000456833 229 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 LSM3P4-201ENST00000502948 309 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
TRIM23P36406 AC093815.1-201ENST00000508637 280 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM23P36406 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM23P36406 NPM1P21-201ENST00000513394 762 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 RN7SKP35-201ENST00000517210 151 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 AC130365.2-201ENST00000525882 1201 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 KCTD9P4-201ENST00000526766 1166 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 AP000620.1-201ENST00000527147 504 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM23P36406 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM23P36406 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 AC007066.2-202ENST00000566531 914 ntBASIC6.17□□□□□ -1.42
TRIM23P36406 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM23P36406 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM23P36406 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TRIM23P36406 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM23P36406 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM23P36406 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM23P36406 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM23P36406 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms