Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.59□□□□□ -0.23
SPCS1Q9Y6A9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SPCS1Q9Y6A9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SPCS1Q9Y6A9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
SPCS1Q9Y6A9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SPCS1Q9Y6A9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.58□□□□□ -0.23
SPCS1Q9Y6A9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SPCS1Q9Y6A9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SPCS1Q9Y6A9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SPCS1Q9Y6A9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 AC126177.7-201ENST00000547904 679 ntBASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC13.56□□□□□ -0.24
SPCS1Q9Y6A9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 TREX1-205ENST00000625293 1783 ntBASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SPCS1Q9Y6A9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms