Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB1Q9Y5G3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB1Q9Y5G3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 AC005332.8-201ENST00000622750 2735 ntBASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGB1Q9Y5G3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 AC135050.7-201ENST00000624508 2218 ntBASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 AC009237.14-201ENST00000609975 1594 ntBASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 AL137784.2-201ENST00000607332 1000 ntBASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 AL358852.1-201ENST00000623174 1268 ntBASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 AL390961.4-201ENST00000623958 2535 ntBASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB1Q9Y5G3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 KRT8P36-201ENST00000489121 1440 ntBASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB1Q9Y5G3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms