Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 HTR7P1-201ENST00000538670 1336 ntBASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 AF186192.3-201ENST00000583427 947 ntBASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 MIR4785-201ENST00000585005 73 ntBASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB2Q9Y5E7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB2Q9Y5E7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
PCDHB2Q9Y5E7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PCDHB2Q9Y5E7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
PCDHB2Q9Y5E7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
PCDHB2Q9Y5E7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB2Q9Y5E7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.64■■□□□ 1.06
PCDHB2Q9Y5E7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
PCDHB2Q9Y5E7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.64■■□□□ 1.06
PCDHB2Q9Y5E7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB2Q9Y5E7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 AC004264.1-201ENST00000608354 794 ntBASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 REXO1L12P-201ENST00000622156 912 ntBASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB2Q9Y5E7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 BX088651.1-201ENST00000540551 451 ntBASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHB2Q9Y5E7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms