Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
EXOSC1Q9Y3B2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 AL136967.2-201ENST00000623968 743 ntBASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EXOSC1Q9Y3B2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 PTBP1P-201ENST00000554374 1601 ntBASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXOSC1Q9Y3B2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
EXOSC1Q9Y3B2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
EXOSC1Q9Y3B2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
EXOSC1Q9Y3B2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.63■□□□□ 0.41
EXOSC1Q9Y3B2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms