Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
DDX41Q9UJV9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.71■■□□□ 1.23
DDX41Q9UJV9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.71■■□□□ 1.23
DDX41Q9UJV9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
DDX41Q9UJV9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
DDX41Q9UJV9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 AC012618.2-201ENST00000428058 849 ntBASIC22.7■■□□□ 1.22
DDX41Q9UJV9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 PLK5-205ENST00000642079 1969 ntBASIC22.7■■□□□ 1.22
DDX41Q9UJV9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
DDX41Q9UJV9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
DDX41Q9UJV9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
DDX41Q9UJV9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
DDX41Q9UJV9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
DDX41Q9UJV9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
DDX41Q9UJV9 AL121829.2-201ENST00000620908 328 ntBASIC22.67■■□□□ 1.22
DDX41Q9UJV9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
DDX41Q9UJV9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.67■■□□□ 1.22
DDX41Q9UJV9 AC124283.5-201ENST00000624661 1809 ntBASIC22.66■■□□□ 1.22
DDX41Q9UJV9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.66■■□□□ 1.22
DDX41Q9UJV9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 PTBP1P-201ENST00000554374 1601 ntBASIC22.65■■□□□ 1.22
DDX41Q9UJV9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.65■■□□□ 1.22
DDX41Q9UJV9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms