Protein–RNA interactions for Protein: Q9UJ68

MSRA, Mitochondrial peptide methionine sulfoxide reductase, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRAQ9UJ68 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
MSRAQ9UJ68 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
MSRAQ9UJ68 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 AC116351.2-201ENST00000606540 1585 ntBASIC21.11■□□□□ 0.97
MSRAQ9UJ68 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 AL353719.1-201ENST00000566847 864 ntBASIC21.11■□□□□ 0.97
MSRAQ9UJ68 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.11■□□□□ 0.97
MSRAQ9UJ68 TFP1-202ENST00000475455 1573 ntBASIC21.1■□□□□ 0.97
MSRAQ9UJ68 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MSRAQ9UJ68 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MSRAQ9UJ68 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
MSRAQ9UJ68 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MSRAQ9UJ68 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSRAQ9UJ68 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSRAQ9UJ68 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
MSRAQ9UJ68 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSRAQ9UJ68 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSRAQ9UJ68 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
MSRAQ9UJ68 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 AC246785.2-201ENST00000432512 513 ntBASIC21.07■□□□□ 0.96
MSRAQ9UJ68 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 KRT18P38-201ENST00000449496 1282 ntBASIC21.07■□□□□ 0.96
MSRAQ9UJ68 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 HLA-A-209ENST00000638375 975 ntBASIC21.07■□□□□ 0.96
MSRAQ9UJ68 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSRAQ9UJ68 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSRAQ9UJ68 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSRAQ9UJ68 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MSRAQ9UJ68 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms