Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 TMEM179-206ENST00000616017 1645 ntBASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBQLN2Q9UHD9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
UBQLN2Q9UHD9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 AC003102.1-202ENST00000563394 1796 ntBASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 AC024257.2-201ENST00000549699 147 ntBASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 AC068880.1-201ENST00000507289 2297 ntBASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 AC135279.3-201ENST00000610945 1311 ntBASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 TREX1-205ENST00000625293 1783 ntBASIC16.64■□□□□ 0.25
UBQLN2Q9UHD9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBQLN2Q9UHD9 OR6D1P-202ENST00000641007 5290 ntBASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 MIR3181-201ENST00000578512 73 ntBASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBQLN2Q9UHD9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 CROCCP3-202ENST00000420820 1947 ntBASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBQLN2Q9UHD9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms