Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.47■□□□□ 0.55
CNIH4Q9P003 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH4Q9P003 SOX15-203ENST00000570788 1093 ntBASIC18.47■□□□□ 0.55
CNIH4Q9P003 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CNIH4Q9P003 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH4Q9P003 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH4Q9P003 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH4Q9P003 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH4Q9P003 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH4Q9P003 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNIH4Q9P003 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH4Q9P003 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH4Q9P003 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH4Q9P003 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH4Q9P003 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH4Q9P003 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH4Q9P003 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH4Q9P003 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH4Q9P003 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CNIH4Q9P003 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNIH4Q9P003 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.54
CNIH4Q9P003 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
CNIH4Q9P003 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH4Q9P003 DPP3P2-201ENST00000416030 1696 ntBASIC18.45■□□□□ 0.54
CNIH4Q9P003 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.45■□□□□ 0.54
CNIH4Q9P003 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH4Q9P003 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH4Q9P003 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.45■□□□□ 0.54
CNIH4Q9P003 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH4Q9P003 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH4Q9P003 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CNIH4Q9P003 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CNIH4Q9P003 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.45■□□□□ 0.54
CNIH4Q9P003 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.45■□□□□ 0.54
CNIH4Q9P003 AC008403.3-201ENST00000598924 454 ntBASIC18.45■□□□□ 0.54
CNIH4Q9P003 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.45■□□□□ 0.54
CNIH4Q9P003 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH4Q9P003 AC006058.3-201ENST00000606217 1069 ntBASIC18.45■□□□□ 0.54
CNIH4Q9P003 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CNIH4Q9P003 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH4Q9P003 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNIH4Q9P003 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.45■□□□□ 0.54
CNIH4Q9P003 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CNIH4Q9P003 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.44■□□□□ 0.54
CNIH4Q9P003 KRT17P3-201ENST00000420566 1262 ntBASIC18.44■□□□□ 0.54
CNIH4Q9P003 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CNIH4Q9P003 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.44■□□□□ 0.54
CNIH4Q9P003 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.44■□□□□ 0.54
CNIH4Q9P003 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CNIH4Q9P003 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.44■□□□□ 0.54
CNIH4Q9P003 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.44■□□□□ 0.54
CNIH4Q9P003 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.44■□□□□ 0.54
CNIH4Q9P003 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNIH4Q9P003 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CNIH4Q9P003 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH4Q9P003 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH4Q9P003 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.43■□□□□ 0.54
CNIH4Q9P003 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH4Q9P003 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH4Q9P003 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CNIH4Q9P003 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CNIH4Q9P003 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.43■□□□□ 0.54
CNIH4Q9P003 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH4Q9P003 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH4Q9P003 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH4Q9P003 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNIH4Q9P003 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CNIH4Q9P003 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.43■□□□□ 0.54
CNIH4Q9P003 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CNIH4Q9P003 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms