Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HCFC1R1Q9NWW0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HCFC1R1Q9NWW0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 CRYGFP-201ENST00000418459 633 ntBASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 ECEL1P2-202ENST00000465689 757 ntBASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 AC097488.1-201ENST00000507834 756 ntBASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC1R1Q9NWW0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 INGX-201ENST00000359239 846 ntBASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 AC131212.4-201ENST00000623606 975 ntBASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC1R1Q9NWW0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 C2orf69P3-201ENST00000565542 1120 ntBASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 AP005242.2-201ENST00000580065 1175 ntBASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.55■□□□□ 0.88
HCFC1R1Q9NWW0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 DUX4L26-201ENST00000489078 1255 ntBASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 DGCR10-201ENST00000609839 495 ntBASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.54■□□□□ 0.88
HCFC1R1Q9NWW0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 AC008040.2-201ENST00000461049 708 ntBASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.53■□□□□ 0.88
HCFC1R1Q9NWW0 NTF6B-201ENST00000591913 560 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms