Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
HINT3Q9NQE9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HINT3Q9NQE9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 AL162412.1-201ENST00000567129 965 ntBASIC17.81■□□□□ 0.44
HINT3Q9NQE9 AC005181.1-201ENST00000604782 1256 ntBASIC17.81■□□□□ 0.44
HINT3Q9NQE9 AL031963.3-201ENST00000606441 850 ntBASIC17.81■□□□□ 0.44
HINT3Q9NQE9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HINT3Q9NQE9 KRT16P6-202ENST00000425692 1426 ntBASIC17.81■□□□□ 0.44
HINT3Q9NQE9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 MIR663A-201ENST00000385250 93 ntBASIC17.8■□□□□ 0.44
HINT3Q9NQE9 CROCCP5-201ENST00000436658 830 ntBASIC17.8■□□□□ 0.44
HINT3Q9NQE9 CNN2P6-201ENST00000439038 900 ntBASIC17.8■□□□□ 0.44
HINT3Q9NQE9 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.8■□□□□ 0.44
HINT3Q9NQE9 AC007322.4-201ENST00000509611 723 ntBASIC17.8■□□□□ 0.44
HINT3Q9NQE9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HINT3Q9NQE9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 AL032819.2-201ENST00000624543 2162 ntBASIC17.79■□□□□ 0.44
HINT3Q9NQE9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.79■□□□□ 0.44
HINT3Q9NQE9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms