Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 AC073210.2-201ENST00000430369 194 ntBASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
FOXP3Q9BZS1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 MIPEPP3-201ENST00000412105 444 ntBASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 AC093787.1-201ENST00000450396 207 ntBASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 MIR4758-201ENST00000577688 71 ntBASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 AC016405.3-201ENST00000607710 860 ntBASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXP3Q9BZS1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 RNA5SP413-201ENST00000516373 109 ntBASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 AC008694.1-202ENST00000636953 945 ntBASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 KRT8P17-201ENST00000453110 1448 ntBASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 PTBP1P-201ENST00000554374 1601 ntBASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FOXP3Q9BZS1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 AC007322.4-201ENST00000509611 723 ntBASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.33■□□□□ 0.85
FOXP3Q9BZS1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
FOXP3Q9BZS1 KRT16P6-202ENST00000425692 1426 ntBASIC20.33■□□□□ 0.84
FOXP3Q9BZS1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXP3Q9BZS1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXP3Q9BZS1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
FOXP3Q9BZS1 CYP21A1P-202ENST00000354927 1481 ntBASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 AP001271.2-201ENST00000624018 1556 ntBASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXP3Q9BZS1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms