Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.65■□□□□ 0.9
LRRC3Q9BY71 AC145285.6-201ENST00000604632 637 ntBASIC20.65■□□□□ 0.9
LRRC3Q9BY71 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
LRRC3Q9BY71 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC3Q9BY71 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRC3Q9BY71 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 YBX1P10-201ENST00000444752 975 ntBASIC20.64■□□□□ 0.89
LRRC3Q9BY71 KRT18P16-201ENST00000510337 1294 ntBASIC20.64■□□□□ 0.89
LRRC3Q9BY71 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 FITM1-202ENST00000559294 800 ntBASIC20.64■□□□□ 0.89
LRRC3Q9BY71 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 MIR6786-201ENST00000616843 113 ntBASIC20.64■□□□□ 0.89
LRRC3Q9BY71 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LRRC3Q9BY71 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 MIR1238-201ENST00000408483 83 ntBASIC20.63■□□□□ 0.89
LRRC3Q9BY71 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.63■□□□□ 0.89
LRRC3Q9BY71 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 AL445675.2-201ENST00000620291 557 ntBASIC20.63■□□□□ 0.89
LRRC3Q9BY71 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.63■□□□□ 0.89
LRRC3Q9BY71 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRC3Q9BY71 CYP2D8P-201ENST00000433633 1490 ntBASIC20.62■□□□□ 0.89
LRRC3Q9BY71 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 AL390955.1-201ENST00000428694 934 ntBASIC20.62■□□□□ 0.89
LRRC3Q9BY71 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRC3Q9BY71 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 SMG8-203ENST00000578922 2178 ntBASIC20.61■□□□□ 0.89
LRRC3Q9BY71 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRC3Q9BY71 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 PHGDH-210ENST00000641115 1638 ntBASIC20.6■□□□□ 0.89
LRRC3Q9BY71 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC3Q9BY71 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms