Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMSS1Q9BQ75 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMSS1Q9BQ75 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CMSS1Q9BQ75 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CMSS1Q9BQ75 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CMSS1Q9BQ75 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CMSS1Q9BQ75 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 UBE2DNL-204ENST00000602536 740 ntBASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 TREX1-205ENST00000625293 1783 ntBASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 AC020763.4-201ENST00000623414 4170 ntBASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.83■□□□□ 0.28
CMSS1Q9BQ75 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 MYCNOS-205ENST00000641950 531 ntBASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 AC093484.2-201ENST00000580996 2166 ntBASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 AC090340.1-201ENST00000620778 4980 ntBASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMSS1Q9BQ75 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 AC004408.2-201ENST00000623613 2777 ntBASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CMSS1Q9BQ75 CYP21A1P-202ENST00000354927 1481 ntBASIC16.8■□□□□ 0.28
CMSS1Q9BQ75 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMSS1Q9BQ75 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CMSS1Q9BQ75 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMSS1Q9BQ75 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CMSS1Q9BQ75 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms