Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA3Q99758 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA3Q99758 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA3Q99758 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC26.5■■□□□ 1.83
ABCA3Q99758 AC246785.2-201ENST00000432512 513 ntBASIC26.5■■□□□ 1.83
ABCA3Q99758 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA3Q99758 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC26.5■■□□□ 1.83
ABCA3Q99758 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC26.5■■□□□ 1.83
ABCA3Q99758 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC26.5■■□□□ 1.83
ABCA3Q99758 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ABCA3Q99758 Z98882.1-201ENST00000622160 2253 ntBASIC26.49■■□□□ 1.83
ABCA3Q99758 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC26.49■■□□□ 1.83
ABCA3Q99758 SPDYE13P-201ENST00000445314 798 ntBASIC26.49■■□□□ 1.83
ABCA3Q99758 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC26.49■■□□□ 1.83
ABCA3Q99758 ETFA-216ENST00000560726 942 ntTSL 3 BASIC26.49■■□□□ 1.83
ABCA3Q99758 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
ABCA3Q99758 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ABCA3Q99758 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.49■■□□□ 1.83
ABCA3Q99758 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.48■■□□□ 1.83
ABCA3Q99758 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.48■■□□□ 1.83
ABCA3Q99758 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
ABCA3Q99758 TSPY17P-201ENST00000450329 467 ntBASIC26.48■■□□□ 1.83
ABCA3Q99758 GLRB-205ENST00000512619 728 ntTSL 3 BASIC26.48■■□□□ 1.83
ABCA3Q99758 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC26.48■■□□□ 1.83
ABCA3Q99758 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ABCA3Q99758 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
ABCA3Q99758 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
ABCA3Q99758 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ABCA3Q99758 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
ABCA3Q99758 PHGDH-210ENST00000641115 1638 ntBASIC26.48■■□□□ 1.83
ABCA3Q99758 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
ABCA3Q99758 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
ABCA3Q99758 VENTXP5-201ENST00000523979 775 ntBASIC26.48■■□□□ 1.83
ABCA3Q99758 AP003041.3-201ENST00000527151 707 ntBASIC26.48■■□□□ 1.83
ABCA3Q99758 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
ABCA3Q99758 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ABCA3Q99758 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ABCA3Q99758 AC005229.4-201ENST00000610085 2198 ntBASIC26.47■■□□□ 1.83
ABCA3Q99758 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ABCA3Q99758 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
ABCA3Q99758 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
ABCA3Q99758 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ABCA3Q99758 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
ABCA3Q99758 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC26.47■■□□□ 1.83
ABCA3Q99758 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.47■■□□□ 1.83
ABCA3Q99758 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
ABCA3Q99758 NPAP1P7-201ENST00000613027 823 ntBASIC26.47■■□□□ 1.83
ABCA3Q99758 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
ABCA3Q99758 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ABCA3Q99758 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ABCA3Q99758 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
ABCA3Q99758 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ABCA3Q99758 SPDYE15P-201ENST00000424157 909 ntBASIC26.46■■□□□ 1.83
ABCA3Q99758 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC26.46■■□□□ 1.83
ABCA3Q99758 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ABCA3Q99758 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ABCA3Q99758 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ABCA3Q99758 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ABCA3Q99758 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.46■■□□□ 1.83
ABCA3Q99758 AL024507.2-201ENST00000606070 2574 ntBASIC26.46■■□□□ 1.83
ABCA3Q99758 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.46■■□□□ 1.83
ABCA3Q99758 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
ABCA3Q99758 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.83
ABCA3Q99758 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC26.45■■□□□ 1.83
ABCA3Q99758 PTK2-216ENST00000519881 863 ntTSL 3 BASIC26.45■■□□□ 1.83
ABCA3Q99758 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC26.45■■□□□ 1.83
ABCA3Q99758 ZNF444P1-201ENST00000559497 298 ntBASIC26.45■■□□□ 1.83
ABCA3Q99758 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC26.45■■□□□ 1.83
ABCA3Q99758 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
ABCA3Q99758 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ABCA3Q99758 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.45■■□□□ 1.82
ABCA3Q99758 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
ABCA3Q99758 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC26.45■■□□□ 1.82
ABCA3Q99758 CNP-204ENST00000472031 1019 ntTSL 2 BASIC26.45■■□□□ 1.82
ABCA3Q99758 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC26.45■■□□□ 1.82
ABCA3Q99758 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC26.45■■□□□ 1.82
ABCA3Q99758 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ABCA3Q99758 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ABCA3Q99758 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC26.44■■□□□ 1.82
ABCA3Q99758 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC26.44■■□□□ 1.82
ABCA3Q99758 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
ABCA3Q99758 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ABCA3Q99758 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ABCA3Q99758 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ABCA3Q99758 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
ABCA3Q99758 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ABCA3Q99758 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ABCA3Q99758 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
ABCA3Q99758 CA15P1-201ENST00000481698 905 ntBASIC26.44■■□□□ 1.82
ABCA3Q99758 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC26.44■■□□□ 1.82
ABCA3Q99758 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC26.44■■□□□ 1.82
ABCA3Q99758 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.44■■□□□ 1.82
ABCA3Q99758 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ABCA3Q99758 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.44■■□□□ 1.82
ABCA3Q99758 AL049796.1-201ENST00000565336 1766 ntBASIC26.43■■□□□ 1.82
ABCA3Q99758 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
ABCA3Q99758 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ABCA3Q99758 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ABCA3Q99758 PVRIG2P-201ENST00000435460 978 ntBASIC26.43■■□□□ 1.82
ABCA3Q99758 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms