Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RAD9AQ99638 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAD9AQ99638 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.19■□□□□ 0.98
RAD9AQ99638 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAD9AQ99638 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAD9AQ99638 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAD9AQ99638 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAD9AQ99638 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAD9AQ99638 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RAD9AQ99638 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAD9AQ99638 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.18■□□□□ 0.98
RAD9AQ99638 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.18■□□□□ 0.98
RAD9AQ99638 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.18■□□□□ 0.98
RAD9AQ99638 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.18■□□□□ 0.98
RAD9AQ99638 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.18■□□□□ 0.98
RAD9AQ99638 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
RAD9AQ99638 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAD9AQ99638 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RAD9AQ99638 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAD9AQ99638 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.18■□□□□ 0.98
RAD9AQ99638 AC018553.1-201ENST00000616682 1458 ntBASIC21.18■□□□□ 0.98
RAD9AQ99638 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAD9AQ99638 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.18■□□□□ 0.98
RAD9AQ99638 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.18■□□□□ 0.98
RAD9AQ99638 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAD9AQ99638 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAD9AQ99638 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.17■□□□□ 0.98
RAD9AQ99638 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAD9AQ99638 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.17■□□□□ 0.98
RAD9AQ99638 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
RAD9AQ99638 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
RAD9AQ99638 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RAD9AQ99638 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.17■□□□□ 0.98
RAD9AQ99638 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.17■□□□□ 0.98
RAD9AQ99638 AL121894.2-201ENST00000602977 491 ntBASIC21.17■□□□□ 0.98
RAD9AQ99638 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.17■□□□□ 0.98
RAD9AQ99638 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAD9AQ99638 KRT16P6-202ENST00000425692 1426 ntBASIC21.17■□□□□ 0.98
RAD9AQ99638 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.17■□□□□ 0.98
RAD9AQ99638 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAD9AQ99638 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAD9AQ99638 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAD9AQ99638 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAD9AQ99638 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAD9AQ99638 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAD9AQ99638 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAD9AQ99638 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.16■□□□□ 0.98
RAD9AQ99638 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAD9AQ99638 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.16■□□□□ 0.98
RAD9AQ99638 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.16■□□□□ 0.98
RAD9AQ99638 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.16■□□□□ 0.98
RAD9AQ99638 KRT18P48-201ENST00000434763 852 ntBASIC21.16■□□□□ 0.98
RAD9AQ99638 TPM4P1-201ENST00000436100 807 ntBASIC21.16■□□□□ 0.98
RAD9AQ99638 AC007663.1-201ENST00000438948 1240 ntBASIC21.16■□□□□ 0.98
RAD9AQ99638 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RAD9AQ99638 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAD9AQ99638 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RAD9AQ99638 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.16■□□□□ 0.98
RAD9AQ99638 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAD9AQ99638 AL121956.5-201ENST00000625261 221 ntBASIC21.16■□□□□ 0.98
RAD9AQ99638 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAD9AQ99638 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAD9AQ99638 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAD9AQ99638 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.15■□□□□ 0.98
RAD9AQ99638 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.15■□□□□ 0.98
RAD9AQ99638 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAD9AQ99638 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAD9AQ99638 AL024507.2-201ENST00000606070 2574 ntBASIC21.15■□□□□ 0.98
RAD9AQ99638 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAD9AQ99638 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAD9AQ99638 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAD9AQ99638 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.15■□□□□ 0.98
RAD9AQ99638 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RAD9AQ99638 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
RAD9AQ99638 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.15■□□□□ 0.98
RAD9AQ99638 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.15■□□□□ 0.98
RAD9AQ99638 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.15■□□□□ 0.98
RAD9AQ99638 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAD9AQ99638 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.15■□□□□ 0.98
RAD9AQ99638 AC011558.1-201ENST00000623459 338 ntBASIC21.15■□□□□ 0.98
RAD9AQ99638 AC141257.4-201ENST00000634557 245 ntBASIC21.15■□□□□ 0.98
RAD9AQ99638 AC136944.6-201ENST00000634818 245 ntBASIC21.15■□□□□ 0.98
RAD9AQ99638 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.15■□□□□ 0.98
RAD9AQ99638 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RAD9AQ99638 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAD9AQ99638 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAD9AQ99638 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.14■□□□□ 0.98
RAD9AQ99638 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
RAD9AQ99638 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.98
RAD9AQ99638 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAD9AQ99638 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAD9AQ99638 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.14■□□□□ 0.98
RAD9AQ99638 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RAD9AQ99638 AL117328.2-201ENST00000624617 1940 ntBASIC21.14■□□□□ 0.98
RAD9AQ99638 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
RAD9AQ99638 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.14■□□□□ 0.97
RAD9AQ99638 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAD9AQ99638 PCED1CP-201ENST00000419887 785 ntBASIC21.14■□□□□ 0.97
RAD9AQ99638 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.14■□□□□ 0.97
RAD9AQ99638 FAM86EP-206ENST00000510506 987 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms