Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CSPG4P5Q96PW8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 AC120498.8-201ENST00000614275 531 ntBASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CSPG4P5Q96PW8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CSPG4P5Q96PW8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 UNC93B5-201ENST00000530315 699 ntBASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.36■□□□□ 0.85
CSPG4P5Q96PW8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CSPG4P5Q96PW8 UNC93B4-201ENST00000505679 747 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms