Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 MIR4767-201ENST00000582827 78 ntBASIC14.89□□□□□ -0.03
AP1S3Q96PC3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 AC112907.3-201ENST00000577781 2400 ntBASIC14.89□□□□□ -0.03
AP1S3Q96PC3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP1S3Q96PC3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 AC131281.2-201ENST00000520478 145 ntBASIC14.88□□□□□ -0.03
AP1S3Q96PC3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 AC105233.4-201ENST00000642045 216 ntBASIC14.88□□□□□ -0.03
AP1S3Q96PC3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.88□□□□□ -0.03
AP1S3Q96PC3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 AL365209.1-201ENST00000624418 6473 ntBASIC14.87□□□□□ -0.03
AP1S3Q96PC3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
AP1S3Q96PC3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S3Q96PC3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms