Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNTNAP3BQ96NU0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 AC127496.7-201ENST00000625110 1798 ntBASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 KRT18P38-201ENST00000449496 1282 ntBASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CNTNAP3BQ96NU0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 PRSS44-201ENST00000515154 1146 ntBASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 AC092329.2-201ENST00000598402 547 ntBASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 AC140113.3-201ENST00000605663 199 ntBASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.88■□□□□ 0.61
CNTNAP3BQ96NU0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 KRT8P8-201ENST00000434750 1448 ntBASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 B3GAT3P1-201ENST00000471720 806 ntBASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 AC092865.5-201ENST00000545435 363 ntBASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 AL441883.1-201ENST00000566170 1045 ntBASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 IFNL4P1-201ENST00000607083 540 ntBASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 AC120114.3-201ENST00000611923 658 ntBASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNTNAP3BQ96NU0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CNTNAP3BQ96NU0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNTNAP3BQ96NU0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms