Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SPG11Q96JI7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.8■□□□□ 0.28
SPG11Q96JI7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.8■□□□□ 0.28
SPG11Q96JI7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SPG11Q96JI7 AC096733.2-201ENST00000609937 1394 ntBASIC16.8■□□□□ 0.28
SPG11Q96JI7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.79■□□□□ 0.28
SPG11Q96JI7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.79■□□□□ 0.28
SPG11Q96JI7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.79■□□□□ 0.28
SPG11Q96JI7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.79■□□□□ 0.28
SPG11Q96JI7 AP000692.2-201ENST00000608391 879 ntBASIC16.79■□□□□ 0.28
SPG11Q96JI7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SPG11Q96JI7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SPG11Q96JI7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.79■□□□□ 0.28
SPG11Q96JI7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.79■□□□□ 0.28
SPG11Q96JI7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SPG11Q96JI7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 AC005332.1-201ENST00000577698 1310 ntBASIC16.79■□□□□ 0.28
SPG11Q96JI7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SPG11Q96JI7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.78■□□□□ 0.28
SPG11Q96JI7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 PCED1CP-201ENST00000419887 785 ntBASIC16.78■□□□□ 0.28
SPG11Q96JI7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.78■□□□□ 0.28
SPG11Q96JI7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
SPG11Q96JI7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SPG11Q96JI7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
SPG11Q96JI7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.78■□□□□ 0.28
SPG11Q96JI7 RCC2P6-201ENST00000526625 1557 ntBASIC16.78■□□□□ 0.28
SPG11Q96JI7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.78■□□□□ 0.28
SPG11Q96JI7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.78■□□□□ 0.28
SPG11Q96JI7 FAM86EP-206ENST00000510506 987 ntBASIC16.78■□□□□ 0.28
SPG11Q96JI7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.78■□□□□ 0.28
SPG11Q96JI7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.78■□□□□ 0.28
SPG11Q96JI7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.78■□□□□ 0.28
SPG11Q96JI7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.78■□□□□ 0.28
SPG11Q96JI7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SPG11Q96JI7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.77■□□□□ 0.28
SPG11Q96JI7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.77■□□□□ 0.28
SPG11Q96JI7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.77■□□□□ 0.28
SPG11Q96JI7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.77■□□□□ 0.28
SPG11Q96JI7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.77■□□□□ 0.28
SPG11Q96JI7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.77■□□□□ 0.28
SPG11Q96JI7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.77■□□□□ 0.28
SPG11Q96JI7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SPG11Q96JI7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SPG11Q96JI7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPG11Q96JI7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SPG11Q96JI7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPG11Q96JI7 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.77■□□□□ 0.27
SPG11Q96JI7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.77■□□□□ 0.27
SPG11Q96JI7 AL359075.1-203ENST00000462729 1002 ntBASIC16.77■□□□□ 0.27
SPG11Q96JI7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.77■□□□□ 0.27
SPG11Q96JI7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.77■□□□□ 0.27
SPG11Q96JI7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SPG11Q96JI7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SPG11Q96JI7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPG11Q96JI7 AC092338.2-201ENST00000568827 1415 ntBASIC16.77■□□□□ 0.27
SPG11Q96JI7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.77■□□□□ 0.27
SPG11Q96JI7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPG11Q96JI7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.77■□□□□ 0.27
SPG11Q96JI7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SPG11Q96JI7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SPG11Q96JI7 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.76■□□□□ 0.27
SPG11Q96JI7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms