Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 AP006294.2-201ENST00000641667 209 ntBASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ECHDC3Q96DC8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 RARRES2P10-201ENST00000564312 460 ntBASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 AC004264.1-201ENST00000608354 794 ntBASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.79■□□□□ 0.76
ECHDC3Q96DC8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 KRT18P16-201ENST00000510337 1294 ntBASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 AC008550.1-201ENST00000511500 884 ntBASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ECHDC3Q96DC8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
ECHDC3Q96DC8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms