Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 KRT18P61-201ENST00000585825 1298 ntBASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FOXRED1Q96CU9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
FOXRED1Q96CU9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXRED1Q96CU9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 AL591742.1-201ENST00000604433 565 ntBASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
FOXRED1Q96CU9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 CYP21A1P-202ENST00000354927 1481 ntBASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXRED1Q96CU9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXRED1Q96CU9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms