Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 TSPY20P-201ENST00000450910 630 ntBASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 AC069544.1-201ENST00000609399 999 ntBASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CTHRC1Q96CG8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 MTDHP1-201ENST00000605323 784 ntBASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CTHRC1Q96CG8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTHRC1Q96CG8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CTHRC1Q96CG8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTHRC1Q96CG8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.33■□□□□ 0.53
CTHRC1Q96CG8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.33■□□□□ 0.53
CTHRC1Q96CG8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 POU5F1P3-201ENST00000428824 1078 ntBASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 AP006587.1-201ENST00000534129 1502 ntBASIC18.33■□□□□ 0.52
CTHRC1Q96CG8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 AC233263.1-201ENST00000578059 224 ntBASIC18.32■□□□□ 0.52
CTHRC1Q96CG8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms