Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.43■□□□□ 0.38
TMEM54Q969K7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM54Q969K7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TMEM54Q969K7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM54Q969K7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 POM121L13P-201ENST00000422362 380 ntBASIC17.42■□□□□ 0.38
TMEM54Q969K7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 AL121829.2-201ENST00000620908 328 ntBASIC17.42■□□□□ 0.38
TMEM54Q969K7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM54Q969K7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM54Q969K7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM54Q969K7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM54Q969K7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM54Q969K7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM54Q969K7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM54Q969K7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM54Q969K7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM54Q969K7 AC026366.1-201ENST00000488803 879 ntBASIC17.4■□□□□ 0.38
TMEM54Q969K7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM54Q969K7 AP003097.1-201ENST00000530657 1135 ntBASIC17.4■□□□□ 0.38
TMEM54Q969K7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM54Q969K7 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM54Q969K7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM54Q969K7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms