Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PTP4A1Q93096 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.74■□□□□ 0.43
PTP4A1Q93096 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 AP001271.2-201ENST00000624018 1556 ntBASIC17.74■□□□□ 0.43
PTP4A1Q93096 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.74■□□□□ 0.43
PTP4A1Q93096 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.74■□□□□ 0.43
PTP4A1Q93096 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTP4A1Q93096 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 AL032819.2-201ENST00000624543 2162 ntBASIC17.73■□□□□ 0.43
PTP4A1Q93096 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 AC007322.1-201ENST00000426983 750 ntBASIC17.73■□□□□ 0.43
PTP4A1Q93096 CNN2P6-201ENST00000439038 900 ntBASIC17.73■□□□□ 0.43
PTP4A1Q93096 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 AC080038.1-201ENST00000611274 1154 ntBASIC17.73■□□□□ 0.43
PTP4A1Q93096 AC092666.2-201ENST00000613287 246 ntBASIC17.73■□□□□ 0.43
PTP4A1Q93096 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PTP4A1Q93096 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.73■□□□□ 0.43
PTP4A1Q93096 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.72■□□□□ 0.43
PTP4A1Q93096 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.72■□□□□ 0.43
PTP4A1Q93096 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PTP4A1Q93096 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 AC105020.6-201ENST00000621523 1217 ntBASIC17.72■□□□□ 0.43
PTP4A1Q93096 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PTP4A1Q93096 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.72■□□□□ 0.43
PTP4A1Q93096 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PTP4A1Q93096 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.71■□□□□ 0.43
PTP4A1Q93096 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PTP4A1Q93096 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.71■□□□□ 0.43
PTP4A1Q93096 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.71■□□□□ 0.43
PTP4A1Q93096 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PTP4A1Q93096 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PTP4A1Q93096 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTP4A1Q93096 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PTP4A1Q93096 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTP4A1Q93096 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.7■□□□□ 0.42
PTP4A1Q93096 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTP4A1Q93096 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms