Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RPGRQ92834 AK4P3-201ENST00000418260 669 ntBASIC24.42■■□□□ 1.5
RPGRQ92834 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RPGRQ92834 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC24.42■■□□□ 1.5
RPGRQ92834 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.42■■□□□ 1.5
RPGRQ92834 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.42■■□□□ 1.5
RPGRQ92834 AC011298.2-201ENST00000617989 482 ntBASIC24.42■■□□□ 1.5
RPGRQ92834 AC130371.2-201ENST00000619443 611 ntBASIC24.42■■□□□ 1.5
RPGRQ92834 AC006128.1-201ENST00000624704 1661 ntBASIC24.42■■□□□ 1.5
RPGRQ92834 RCC2P6-201ENST00000526625 1557 ntBASIC24.42■■□□□ 1.5
RPGRQ92834 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RPGRQ92834 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RPGRQ92834 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RPGRQ92834 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RPGRQ92834 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RPGRQ92834 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RPGRQ92834 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
RPGRQ92834 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
RPGRQ92834 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.41■■□□□ 1.5
RPGRQ92834 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC24.41■■□□□ 1.5
RPGRQ92834 BX664615.1-201ENST00000443558 458 ntBASIC24.41■■□□□ 1.5
RPGRQ92834 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.41■■□□□ 1.5
RPGRQ92834 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.41■■□□□ 1.5
RPGRQ92834 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.41■■□□□ 1.5
RPGRQ92834 AP000692.2-201ENST00000608391 879 ntBASIC24.41■■□□□ 1.5
RPGRQ92834 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.41■■□□□ 1.5
RPGRQ92834 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
RPGRQ92834 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
RPGRQ92834 PHGDH-210ENST00000641115 1638 ntBASIC24.41■■□□□ 1.5
RPGRQ92834 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RPGRQ92834 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.41■■□□□ 1.5
RPGRQ92834 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.41■■□□□ 1.5
RPGRQ92834 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
RPGRQ92834 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RPGRQ92834 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RPGRQ92834 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
RPGRQ92834 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RPGRQ92834 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.4■■□□□ 1.5
RPGRQ92834 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.4■■□□□ 1.5
RPGRQ92834 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
RPGRQ92834 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RPGRQ92834 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RPGRQ92834 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.4■■□□□ 1.5
RPGRQ92834 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RPGRQ92834 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.39■■□□□ 1.5
RPGRQ92834 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RPGRQ92834 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RPGRQ92834 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
RPGRQ92834 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
RPGRQ92834 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.39■■□□□ 1.49
RPGRQ92834 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.39■■□□□ 1.49
RPGRQ92834 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC24.39■■□□□ 1.49
RPGRQ92834 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
RPGRQ92834 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC24.39■■□□□ 1.49
RPGRQ92834 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.39■■□□□ 1.49
RPGRQ92834 AC007225.1-201ENST00000566331 1836 ntBASIC24.39■■□□□ 1.49
RPGRQ92834 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
RPGRQ92834 AC092720.2-201ENST00000602388 1665 ntBASIC24.39■■□□□ 1.49
RPGRQ92834 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RPGRQ92834 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
RPGRQ92834 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
RPGRQ92834 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.39■■□□□ 1.49
RPGRQ92834 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
RPGRQ92834 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
RPGRQ92834 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.38■■□□□ 1.49
RPGRQ92834 AC004951.3-201ENST00000418645 1148 ntBASIC24.38■■□□□ 1.49
RPGRQ92834 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RPGRQ92834 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 LINC01238-205ENST00000567549 1107 ntBASIC24.38■■□□□ 1.49
RPGRQ92834 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RPGRQ92834 HLA-A-209ENST00000638375 975 ntBASIC24.38■■□□□ 1.49
RPGRQ92834 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RPGRQ92834 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPGRQ92834 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RPGRQ92834 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RPGRQ92834 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.37■■□□□ 1.49
RPGRQ92834 HMGA1P5-201ENST00000412453 271 ntBASIC24.37■■□□□ 1.49
RPGRQ92834 AC022616.7-201ENST00000525383 220 ntBASIC24.37■■□□□ 1.49
RPGRQ92834 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
RPGRQ92834 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.37■■□□□ 1.49
RPGRQ92834 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
RPGRQ92834 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPGRQ92834 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RPGRQ92834 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPGRQ92834 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RPGRQ92834 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RPGRQ92834 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
RPGRQ92834 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPGRQ92834 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RPGRQ92834 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms