Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IL1Q8TBN0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IL1Q8TBN0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3IL1Q8TBN0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 AF213884.3-201ENST00000563833 479 ntBASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RAB3IL1Q8TBN0 AC020763.4-201ENST00000623414 4170 ntBASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 SLC7A5P1-201ENST00000568957 537 ntBASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 AP001160.3-201ENST00000601484 763 ntBASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IL1Q8TBN0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB3IL1Q8TBN0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.64■□□□□ 0.74
RAB3IL1Q8TBN0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.64■□□□□ 0.74
RAB3IL1Q8TBN0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
RAB3IL1Q8TBN0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.64■□□□□ 0.74
RAB3IL1Q8TBN0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB3IL1Q8TBN0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 LINC01465-201ENST00000408887 1940 ntBASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IL1Q8TBN0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 CDV3P1-201ENST00000471403 739 ntBASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 AL032819.2-201ENST00000624543 2162 ntBASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB3IL1Q8TBN0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3IL1Q8TBN0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms