Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 AC079834.2-201ENST00000609776 1949 ntBASIC15.41■□□□□ 0.06
LINC01006Q8NI28 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 ECEL1P2-202ENST00000465689 757 ntBASIC15.41■□□□□ 0.06
LINC01006Q8NI28 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 AC128688.1-201ENST00000487626 519 ntBASIC15.41■□□□□ 0.06
LINC01006Q8NI28 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC01006Q8NI28 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 SLC25A1P4-201ENST00000567977 778 ntBASIC15.4■□□□□ 0.06
LINC01006Q8NI28 NTF6B-201ENST00000591913 560 ntBASIC15.4■□□□□ 0.06
LINC01006Q8NI28 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 AC130371.2-201ENST00000619443 611 ntBASIC15.4■□□□□ 0.06
LINC01006Q8NI28 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
LINC01006Q8NI28 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.39■□□□□ 0.05
LINC01006Q8NI28 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01006Q8NI28 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01006Q8NI28 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms