Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDRT4Q8N9R6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDRT4Q8N9R6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDRT4Q8N9R6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 RPS2P52-201ENST00000469610 820 ntBASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 TFP1-202ENST00000475455 1573 ntBASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDRT4Q8N9R6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms