Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 AC104564.3-201ENST00000582367 638 ntBASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 RAP2CP1-202ENST00000605179 643 ntBASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 AL513477.1-201ENST00000602865 2407 ntBASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SREK1IP1Q8N9Q2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 AC026202.3-201ENST00000600805 1127 ntBASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 AC133552.2-201ENST00000619106 1032 ntBASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.38■□□□□ 0.21
SREK1IP1Q8N9Q2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SREK1IP1Q8N9Q2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 AC090877.2-201ENST00000558441 1738 ntBASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 AP004607.7-201ENST00000527152 1677 ntBASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SREK1IP1Q8N9Q2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SREK1IP1Q8N9Q2 AC063926.3-201ENST00000624734 5658 ntBASIC16.35■□□□□ 0.21
SREK1IP1Q8N9Q2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SREK1IP1Q8N9Q2 FLJ16779-201ENST00000612722 7638 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms