Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 AC128688.1-201ENST00000487626 519 ntBASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 AF106564.1-201ENST00000607058 2553 ntBASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.1■□□□□ 0.81
SYNPOQ8N3V7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 MESTP1-201ENST00000404287 994 ntBASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 ATP5G1P1-201ENST00000448724 379 ntBASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 NTF6B-201ENST00000591913 560 ntBASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SYNPOQ8N3V7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 AL049796.1-201ENST00000565336 1766 ntBASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SYNPOQ8N3V7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SYNPOQ8N3V7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYNPOQ8N3V7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SYNPOQ8N3V7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYNPOQ8N3V7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SYNPOQ8N3V7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYNPOQ8N3V7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYNPOQ8N3V7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYNPOQ8N3V7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYNPOQ8N3V7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 B3GAT3P1-201ENST00000471720 806 ntBASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYNPOQ8N3V7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYNPOQ8N3V7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms