Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 AC105020.6-201ENST00000621523 1217 ntBASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC01561Q8N1V8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 AL032819.2-201ENST00000624543 2162 ntBASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC01561Q8N1V8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC01561Q8N1V8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01561Q8N1V8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms